Shewanella cyperi: JYB88_15575
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Entry
JYB88_15575 CDS
T07829
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
scyp
Shewanella cyperi
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scyp03032
]
JYB88_15575
03036 Chromosome and associated proteins [BR:
scyp03036
]
JYB88_15575
03400 DNA repair and recombination proteins [BR:
scyp03400
]
JYB88_15575
DNA replication proteins [BR:
scyp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JYB88_15575
Chromosome and associated proteins [BR:
scyp03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
JYB88_15575
DNA repair and recombination proteins [BR:
scyp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
JYB88_15575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
UBA_HYPK
HU-CCDC81_euk_1
Peptidase_C80
Motif
Other DBs
NCBI-ProteinID:
QSX29598
UniProt:
A0A975AKV3
LinkDB
All DBs
Position
3514353..3514625
Genome browser
AA seq
90 aa
AA seq
DB search
MNKAELIAKIAEQAELSKADAARALKSFEEAVTEAMKNGDKISIVGFGSFETSTRAARTG
RNPQTGKEIQIPAATIPKFKAGKALRDSVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagctgaactgatcgccaagattgccgagcaagcagaattgagcaaggccgac
gcggcacgtgcgctgaaatcctttgaagaagcggtaaccgaagccatgaagaatggcgac
aaaatctccatcgtgggttttggttcatttgaaacctccacccgcgccgcccgcaccggt
cgcaatcctcaaaccggcaaagagatccagatcccagcggcaaccattcccaagttcaag
gccggcaaggctctgcgcgacagcgtgaactaa
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integrated database retrieval system
