Shewanella cyperi: JYB88_15980
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Entry
JYB88_15980 CDS
T07829
Symbol
rng
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
scyp
Shewanella cyperi
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scyp03019
]
JYB88_15980 (rng)
03009 Ribosome biogenesis [BR:
scyp03009
]
JYB88_15980 (rng)
Messenger RNA biogenesis [BR:
scyp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JYB88_15980 (rng)
Ribosome biogenesis [BR:
scyp03009
]
Prokaryotic type
rRNA processing factors
JYB88_15980 (rng)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
QSX29671
UniProt:
A0A975AKE9
LinkDB
All DBs
Position
complement(3602614..3604080)
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AA seq
488 aa
AA seq
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MGSELLINVTPTEARVALVEHGLLQEVHVERRMKRGLVGNIYKGKISRVLPGMQAAFVDI
GLDKAAFLHASDIVPHTECVADVEKGNFVVRDIAELVRQGQDIMVQVVKDPLGTKGARLT
TDITLPSRYLVFMPGSAHVGVSQRIESEEERARLKAITLPFVDDDGGFIIRTAAENVGED
ELSQDAAFLRRVWAKVSERRKRKGATLLYQDLALPVRIVRDFVGQELDRVQVDSRGTFLE
LQQFAQEFMPELADKIEHYQGNVPIFDLYDVENEIQRALGRKVELKSGGYLIIDQTEAMT
TVDINTGAFVGHRNLEETIFNTNLEATQAIARQLRLRNLGGIIIIDFIDMLNEDHKQRVL
ASLTAALAADRVKTNISGFSGLGLVEMTRKRTRESLEHVLCGECPACKGTGSMKTVETVS
YEIFREIIRLNKAYAADEFLLYCSPAVHHSLSGDEGHLLAELEVYIGKRIRVQNEPMYAQ
NKYDVVMV
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgggatccgagttgctgatcaatgtcacgcccaccgaggcccgggtggccctggtggag
cacggcctgttacaggaagtccacgtagagcggcgcatgaaacgcggcctggtgggcaat
atctacaagggcaagatcagccgggtactgccgggtatgcaggctgcctttgtcgacatt
ggcctggacaaggccgccttcctgcacgcttccgatatagtgccccacaccgagtgcgtc
gccgatgtggagaaaggcaactttgtggtgcgcgacatcgccgagctggtgcgccagggc
caggacatcatggtgcaggtggtcaaggatcccctcggcaccaagggcgcccgcctcacc
acagacattaccctgccttcccgttatctggtgtttatgcctggttccgcccatgtgggt
gtatcccagcgcatcgagtccgaggaagagcgcgcccgcctcaaagccatcacattgcca
tttgtcgatgatgacggtggttttatcatacgcaccgcggccgagaatgtcggcgaagat
gagctgtcccaggatgccgcgttcctgcgacgggtatgggccaaggtcagcgagcgccgc
aaacgcaagggcgcgaccctcttgtatcaggatctggcactgccggtgcgcatagtgcgc
gattttgtcggtcaggagctggatcgggtgcaggtggactcccgcggtacttttctggaa
ttgcagcagtttgcccaggaattcatgcccgagttggcggataagattgagcactaccag
ggcaatgtccctattttcgacctgtacgatgtggagaacgagatccagcgggccctgggg
cgcaaggtggagctcaagtccggtggttacctcatcattgaccagaccgaggccatgacc
acggtcgatatcaataccggcgccttcgtcggccaccgcaatctggaagaaaccatattc
aacaccaacctggaagcaacccaggccattgcccggcaactgcggctgcgcaatctcggc
ggcataatcatcatagatttcatcgatatgttgaacgaggaccacaagcagcgggtgctt
gccagcctgactgcggcgttggcggcggacagggtcaagaccaatatcagcggtttttcc
ggtctggggctggtggaaatgacccgcaagcgcacccgcgagagcttggagcatgtgctg
tgcggtgagtgccccgcctgcaagggcacgggctcgatgaagacggtggaaaccgtcagc
tatgagatcttccgcgaaattatccgcctcaacaaggcctatgcggcggacgagttcctg
ctctactgttccccggcggtgcaccacagtctctccggcgatgagggccacctgctggct
gagctggaagtctatataggcaaacgcatccgggtgcagaacgaacccatgtatgcccag
aacaaatacgatgtggtgatggtctag
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