Shewanella cyperi: JYB88_16115
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Entry
JYB88_16115 CDS
T07829
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
scyp
Shewanella cyperi
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyp02000
]
JYB88_16115
Transporters [BR:
scyp02000
]
Other transporters
Pores ion channels [TC:
1
]
JYB88_16115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Motif
Other DBs
NCBI-ProteinID:
QSX29695
UniProt:
A0A974XJS4
LinkDB
All DBs
Position
3631109..3633130
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AA seq
673 aa
AA seq
DB search
MRFSLSPLSLGILPLLCAAAQAQTMDEVLEVRGQRPLNSLSSSPKDKVQADLGALLRDMA
GAGLNSNGPLSGIAQYRGLFGDRVHQDIDGHSHAGAGPNAMDTPLSYGSGILTEALKLER
GIADIARGTDTLGGSLHVVESQARANEYSAGLRGQYQANGDQSRLGAKANLGSEHQALLL
FADHQQGLTAPQSGAGHRLLPGIYQQSQFGAKYRLFLNDEDYLGLDARHLETDNSATPAL
PMDIDYIRSDRVHTDGSHALGDSRLDWQLGYGNGRHGMDNDSLRLRMPTMAARYNQADAE
DWQASIKLSDGDWQFGLDISQARHNSVITDPNNPMLRVDNFNGVRDDSYSLFGQWQSVLA
DWQWQLGARVKHYRFDADAVNHSMAAMKPAIKTLMDRFNQADRSGSDTGLDLVLQGRRAL
SEDLAAVVGLARKQANASYQQRFLWVPMQSTGGLADGRTYVGTLDLQLETAWQLELGLDL
QQQQWLLSPRLFVQRIDNYIQGLPTEDPALLMAGDAHTLVFSNTDALLYGMDIQGELRLT
EHWQLMFAAAYIRGERRDEDGDLYRIAPPNANLGLVYNSGNWFAGIHGRAVAAQDKVSAV
QLEQATPGYFTLDLKAGWQGNNWRLSAGVDNLFDLEYADHLGGYNRVAGGDVPVGERLPQ
PGLNAWLMADYRL
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttttcactctctccgctttccctgggcatcttgcccctcttgtgtgccgcggct
caggcacaaaccatggacgaagtgctggaggtgcgcggccaaaggccgctgaacagcctc
agcagcagccccaaggacaaggttcaggccgatctcggcgccctgctcagggacatggcc
ggcgccggcctcaacagtaacggccccctgtccggcattgcccaatatcgcggcctgttc
ggtgacagggttcaccaggacatagatggccacagccacgcgggcgcgggtcccaatgcc
atggatacccccttgagctatggcagcggcatactgaccgaagcgctgaaactggagcgc
ggcattgccgacatagctcgcggcactgataccctgggtggcagcctgcatgtggttgag
tcccaggctagggcgaacgagtattcggccggcttacggggccagtatcaggccaatggc
gatcaaagccgccttggcgccaaggccaatctgggctcagagcaccaggcgctgttactg
tttgccgaccatcaacaagggctcacggcgccccaaagcggcgcgggccacagattgctg
cctggcatttatcagcagagccagttcggcgccaagtaccgcctgttcctgaacgatgag
gattatcttggactggatgcccgccatctggaaaccgacaacagcgccaccccggccctg
cccatggacatagactatatccgcagtgaccgtgtccacaccgacggcagtcacgccctg
ggtgattcacgcctcgattggcagctgggctatggcaacggccgccacggcatggataac
gacagcctgaggctgcgaatgccaaccatggccgcccgctataaccaggccgacgccgag
gactggcaggcaagcattaagctgagcgacggcgattggcagtttggtctggatatcagc
caggccaggcacaattcggttatcacggatcccaacaatcccatgctacgggtggataac
ttcaacggcgtcagggatgacagctacagcctgttcggccagtggcagagcgtgcttgcc
gactggcaatggcaactgggggccagggtcaagcactaccgtttcgatgccgacgcggtc
aatcactccatggccgccatgaagcccgccatcaagaccctgatggacagatttaaccag
gccgaccgcagcggcagcgataccgggctggacttggtgctgcagggccgccgcgccctt
tcagaagatctggctgccgtagtgggtctggcccgcaaacaggccaatgccagttaccaa
cagcgcttcctgtgggtgcctatgcagtccaccggcggtttggcggacggacgcacctat
gtgggcacactggatttgcagctggaaaccgcctggcaattggagctggggctggatctg
cagcagcaacaatggctcctgagcccgcggctgttcgtgcagcgcatcgataactatatc
cagggcctgccgacggaagatccggcactgctgatggccggcgatgcccataccctggtg
ttcagcaataccgatgccctgctctacggcatggatattcagggcgagctgagactgacc
gaacactggcagctcatgtttgcggccgcctatattcgcggcgagcgccgggatgaggac
ggggatctgtaccgcatagcaccgcccaatgccaatctgggcctggtctataacagcggg
aattggtttgccggcattcacggccgggcggtggcggcccaggacaaagtgtccgccgtg
cagctggaacaggcgaccccggggtatttcaccctcgacctcaaggccggctggcagggc
aacaactggcgcctgagtgccggggtcgacaacctgttcgaccttgaatatgccgatcat
ctcggtggctataaccgggtcgccggtggcgatgtgcccgtgggcgagcgcctgccacaa
ccgggcctcaatgcctggttgatggcggactatcgcctgtaa
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