Shewanella cyperi: JYB88_16285
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Entry
JYB88_16285 CDS
T07829
Name
(GenBank) TonB-dependent receptor
Organism
scyp
Shewanella cyperi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarboxypepD_reg
TonB_dep_Rec
CarbopepD_reg_2
Plug
SdrD_B
SpaA
fn3_3
EMC7_beta-sandw
Motif
Other DBs
NCBI-ProteinID:
QSX29726
UniProt:
A0A974XMF0
LinkDB
All DBs
Position
complement(3660139..3663135)
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AA seq
998 aa
AA seq
DB search
MLETSNRALIGARKSLAAIAVSSALLLAVPQAMAVDGSSIVKGQVVSGNGAAIADATITL
RHKTKGLVYKISTNDKGEYLLRNVPVGEYDIEISKDGFEASHEASVQVVIGQALILDGQL
LASGANMERIAVTGSVIRRVDMASSTSGVSFSQEDLQTMPVNSGFESIALLAPGTAAPGG
SSFKGASSFGGASSAENGYYFNGMNVTSIRTGLGSIALPWEAISQTQVMTGAVSPEFGGA
MGGIVNAVSKSGENEFKFGTQVRWDPDSMRANHDSIFNSDGIVSTNTRQDGYDFRELQLW
ASGAIVEDKLFYYGLFNPRRDDSDWAGQSTAGHRDRQEDRWFAKLDWYISQDHSIGLSAL
NNKRTYDKQTFAYDFESNSVGAPIGVKAPGRDGGKVYSINYNGYFSDNFSVSAVVGRTQE
NIDNVVASANPSVYDNRNGEYLSQHTDSSISEQEFTRDQARVDFNWDLEQHSLQFGIDYT
KVLVDYTSAQNGIGDAQGWWSVKTAGANSVSGAANGEDYIERRVRTRYTDSEVSSLAFYA
SDSWQVTDQLVLNLGLRYSGFENTVSDGRAYVSIDNQIAPRVQAVYDLHGDGSAKLFASY
GRYFQPVSANMNITQGSSSIEWFEYFELDQLDADGQPVLLADGSPSRGAMLRERYWRQRG
ITEPGLIASSNLKPMYSDEFTLGYQQELFDSMTGGVRFIYRDLGRSLEDTDVGPVLAKKL
AELGIEDNVGQGSYYVLNNPGEAITLSYDFDGDGQVDNVTLSQDELQLPKASRRYLAMEF
TLDGRVNEDLTINSSYTWSHSYGNTEGLVKTDNDQADPGWTTSYDYADLMDHGYGNLPND
HRHAFKVSGAYQLTDALTLGLVARATSGRPQNYFSQHPEGVDSCAAGSPWEDCISRYYDQ
ASHYDENSNPAPRGSVGTLPWVTSVDLSLSYSTELFGGDLTLKGTVYNLLNSDAATDINE
ERSRYADTANGLELNPDYGMVTGRQEARYLSLIARYEF
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgttggaaacaagcaatagagccttaatcggggctcgcaaatcactggcggcgattgcc
gtcagctcggcactgttgttggcggtcccccaggccatggcggttgatggctccagtatc
gtcaagggccaggtggtcagtggcaatggtgccgccattgccgatgccaccattacactc
aggcacaaaaccaagggcttggtttacaagataagcaccaatgacaagggcgagtatctg
ctgcgtaacgtgcccgtgggtgagtatgacattgagatcagcaaggatggctttgaagcg
tcccatgaagcatccgtgcaggtggtcataggccaggcattaatcctggatggccaactg
ctggcatcaggtgccaatatggagcgcatcgcagtgaccggcagcgtcatccgccgggtg
gacatggcctcttctacctctggcgtgtcattcagccaggaagatttgcaaaccatgccg
gttaactcgggctttgaaagcattgccctgctggcaccgggtactgcggcaccgggtggc
tcatcttttaagggggcttccagtttcggcggggcctcatctgctgaaaatggctattat
ttcaacggtatgaatgtgaccagcatcaggaccggtttgggctcaatcgccttgccatgg
gaagcgatttcccagacccaggtgatgacaggtgccgtcagccccgagtttggtggtgcc
atgggcggcatagtcaatgcggtatccaaatccggtgagaatgagttcaaattcggcacc
caggtgcgctgggatcccgacagtatgcgggccaatcatgactctattttcaacagtgat
ggcatagtcagcaccaatacccgtcaggacggttacgatttccgtgaactgcagctgtgg
gccagtggtgccatcgtcgaggataaactgttttattacggcctgttcaatccacgccgt
gatgacagcgactgggccgggcagtcgacagcgggtcacagggacaggcaggaagaccgc
tggtttgccaagttggattggtatatttcccaggaccactccatcggtctgtcggcactc
aacaacaaaagaacctatgacaaacaaacctttgcctatgattttgagagcaacagtgtt
ggtgcacccataggcgtcaaggcgcctggccgggacggcggcaaggtctacagcatcaac
tataacggctatttcagcgataacttttcggtatcggccgtggtcggtcgcacccaggag
aacatagacaatgtggtggcctcggccaatccatctgtgtatgacaatcgcaatggcgaa
tacctgagtcaacacacggattcttccatttcggagcaggaatttacccgggatcaggcc
agggttgacttcaactgggatctggaacagcactcgttgcagttcggtattgattacacc
aaggtgttggtggactatacctcggcgcaaaatggcatcggcgatgctcagggctggtgg
tcggtgaaaaccgcaggagccaacagtgtttccggagcggccaacggtgaggattacatc
gagcgccgggtccggacccgttacacggactccgaggtcagctcgctggctttctatgcc
agcgattcctggcaggttacagaccagctggtgctgaatttggggctgcgttacagcggc
tttgaaaataccgtttccgatggtcgtgcctatgtgtccatcgataatcagatagctccc
cgagttcaagcggtttacgatctgcatggagatggcagtgccaaactgtttgccagctat
ggccgctatttccagcctgtgtcggccaatatgaacattacccagggctcttcttccatc
gagtggtttgagtacttcgagctggatcagctcgacgccgatggacagccggtgctgctg
gccgatggttcacccagtcgcggcgccatgctgagggagcgctattggcgccagcgcggc
attaccgagccgggattgattgcctcgtccaaccttaagcccatgtacagcgatgagttt
accctgggctatcagcaggagctgttcgacagcatgaccggcggtgtgcgttttatctac
cgcgatctgggccgcagcctggaggacacggatgtgggccctgtgctggcgaaaaagctg
gcggaactgggtatcgaagacaatgtggggcagggctcctactatgtgctcaacaacccg
ggtgaagccattaccctgtcctatgatttcgacggtgatggtcaggtcgacaatgtcacc
ttgagtcaggatgagttgcagctgcccaaggcctcgcgccgttacctggccatggagttc
accctggatggccgggtcaacgaagatttgaccatcaacagctcctatacctggtcccac
agttatggcaacaccgagggcctggtgaagacggacaatgatcaagcggatccgggctgg
accacctcctatgactatgcggatctgatggatcacggctatggcaacctgccgaacgat
caccgtcatgccttcaaggtcagcggagcctatcaattgaccgatgccctgaccctggga
ctggtggcaagggcgacctctggcagaccccagaactacttctcccagcaccctgaaggc
gtcgacagctgtgccgccggcagcccgtgggaagactgtatcagccgttactacgatcag
gcatcgcactatgatgaaaatagtaacccggcaccccgtggcagtgttggcaccctgcct
tgggtgaccagtgtggatctgtcgctgagctacagtaccgagctgtttggtggcgatctg
accctcaagggtacggtttacaacctgctcaacagcgatgccgccaccgacatcaatgag
gagcgcagccgctacgctgataccgccaatggcctggagctgaaccctgactatggcatg
gtgaccggacgtcaggaggcccgctacctgtcgctgattgcccgctacgagttctag
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