Shewanella cyperi: JYB88_16400
Help
Entry
JYB88_16400 CDS
T07829
Name
(GenBank) type II secretion system F family protein
KO
K02653
type IV pilus assembly protein PilC
Organism
scyp
Shewanella cyperi
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
scyp02044
]
JYB88_16400
02035 Bacterial motility proteins [BR:
scyp02035
]
JYB88_16400
Secretion system [BR:
scyp02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
JYB88_16400
Bacterial motility proteins [BR:
scyp02035
]
Pilus system
Pilus assembly proteins
JYB88_16400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
TMEM175
DUF3671
Motif
Other DBs
NCBI-ProteinID:
QSX29749
UniProt:
A0A974XJW6
LinkDB
All DBs
Position
3697211..3698479
Genome browser
AA seq
422 aa
AA seq
DB search
MATATASRRAGKGVKAGAKSQPKIFTFTWTGLNKDGKKSSGELRGGSIADIKTILKSQGI
SPKNVKKKSEGIKLFEAKINAMDIAMVTRQIATMMTAGVPLVTTIEMLGRGHEKPKMREL
LGTILSEIQSGIPLSDALRPHRLYFDDLYVDLVGAGEHSGSLDTVFDRIATYKEKAEALK
SKIKKAMFYPAAVVIVAIAVTILLLVFVVPQFEEIFKGFGAELPAFTQLVVGISRFLQAY
WYIFLISIVIFVFTFVRLHRNSQTFRDRIDELVLKIPVIGEILHKGAMARFARTLATTFA
AGVPLIDGLESAAGASGNAVYKKALLKIRQEVMAGMQMNVAMRTVNLFPDMLIQMVMIGE
ESGSLDNMLNKVANIYEMQVDDAVDALSSLIEPMMMVVIGTIVGGLIVAMYLPIFNLGNV
IG
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagccactgcatccagaagagccggtaaaggggtaaaagcaggcgccaaaagc
caacccaagatatttaccttcacttggacgggcttaaataaagacggcaaaaaaagcagc
ggtgaactacgaggcggctcaattgcagatataaaaaccatcctcaagtctcaaggtata
tcacccaaaaacgtcaagaaaaaatcagaaggcataaagctgttcgaagccaagatcaat
gctatggacattgctatggtcacccgccaaatagcgacgatgatgaccgcaggggttccc
ttggtcaccacaattgaaatgcttggccgtggccatgaaaaacccaaaatgcgggaattg
cttggcaccattctcagtgaaatccaatccggtatcccactgtccgatgctttgagacct
cacagactgtatttcgatgatttatatgttgacttggttggcgccggtgagcattcaggc
tcccttgatacagtattcgaccgcattgctacttacaaagaaaaagccgaagcactgaag
tcaaaaatcaaaaaggcgatgttttaccccgctgccgtagtgattgtggccatagctgtg
acaattctgctgctggtatttgtggtaccccaatttgaagagatctttaaaggttttggt
gcggaattgccggcatttacccagctggtcgtaggcatatcccgctttttgcaggcctat
tggtacatctttttaatttcaattgtgatttttgtgtttacctttgtgcgcctgcaccgt
aattcgcagacgttcagggacagaattgacgaactggtgttaaaaatccctgttataggt
gagatattgcataaaggtgccatggcccgttttgcccgcaccttagcgaccacctttgct
gccggtgtccccttaatcgatggtcttgagtcggcagcaggcgcttccggtaacgccgtc
tataaaaaagcactgctcaaaattcgccaggaagtcatggctggtatgcaaatgaacgta
gccatgcgcacggtcaatttatttcccgacatgctgatccagatggtgatgataggtgaa
gaatccggttcattggataatatgctgaacaaggtcgccaacatatatgagatgcaggta
gacgatgccgttgatgccctgtccagtttgattgagccgatgatgatggtggtaattggc
acaattgttggtgggctgatagtagccatgtatttgcccatatttaacttgggtaatgtg
atcggataa
DBGET
integrated database retrieval system
