Shewanella cyperi: JYB88_16505
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Entry
JYB88_16505 CDS
T07829
Name
(GenBank) retention module-containing protein
Organism
scyp
Shewanella cyperi
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_4
Big_9
K319L-like_PKD
HemolysinCabind
Motif
Other DBs
NCBI-ProteinID:
QSX29768
UniProt:
A0A974XM40
LinkDB
All DBs
Position
3715792..3724806
Genome browser
AA seq
3004 aa
AA seq
DB search
MGIAINQQDAVVTQIVGQLRAKDEQGNVRTLNIGDIIHQGEQLIFASDDKFVIEYADGTR
MSEVNMQSQAQTTPASTQMPDLPADATDAEIAALQAQILAGQDPTADLPETAAGAGGGGT
EGGFDYTSVGRDGAETLASAGWDTTGFTTTTLTAQQEPLLTDILPEAPFLANANLTFSDA
ALPLGSTPDAQQVTQDGTLAFSATSGVLNISIDGVAIVTDGIFNGPVTISTSYGVLTISG
VDLANGILSFSFTQTAAVDHSQGDIFNQLFSLLLTDNLGVTTSSTLTISVGDDAPSGQND
SNSLSEDTSLAVIGNLLANDTQGADTAQVTAAGAGSATNISVGQASQINGSFGVLTLNSD
GSYSYQLNTGLQAVQALAQGQTLNEVFSYVLQDADGDISVQTLTITITGSNDAPVITTEQ
GQDLGTVIEAGNFDDGSFNPGVPSVSGNLSASDVDNGAVLTWSGNADSPFGSFSIDAATG
AWTYVLDNSAADSLQEGEVRIETFLVTVTDEFGATATQEVTITIVGSNDAPILSAETSGS
VTEDQNVSAGMLVDSGALSFTDVDLGDDHQMSSSYNGDISWSGGSLTQDQINALLAGFSV
DSNSWDYSIANSLVQFLSVGETITLSFTVTVTDEFGASDSQVVTLTIHGTNDAPVITTEQ
GQALGTVIEAGNFDDGSFNPGVPSVSGNLSASDVDNGAVLTWSGNADSPFGSFSIDAATG
AWTYVLDNSAADSLQEGEVRIETFLVTVTDEFGATATQEVTITIVGSNDAPILSAETSGS
VTEDQNVSAGMLVDSGALSFTDVDLGDDHQMSSSYNGDINWSGGSLTQDQINALLAGFSV
DSNSWDYSIANSLVQFLSIGETITLSFTVTVTDEFGASDSQVVTLTIHGTNDGPVINPPA
EGDADGTVIEAGNFDNGNVDPGSPEISGTLTATDADHDAVLTWSGNAEGEFGDFVIDPET
GTWTYTIDNSAADSLQEGETRTETFLVTVTDQNGATSTQEVTITIVGSNDAPILTLDDSG
SVIEDVDVVAGMLSDSGALSFTDVDVGDSHEISTSYNGDISWSGGALTLAEINALVAGFS
ADSDSWDFNIANSLVQFLAVGETITLSFTVTVTDEFGASDSQQVNITITGTNDAPVLTVD
TSGSVTEDVNVLAGMLSDSGTLSFSDVDVNDSHSVSSLYNNDISWSGGALTQDQINALVA
GFSADSDSWDYSIANSLVQFLAVGETITLSFNVSVDDGHGGIDTETVTITINGTNDAPVL
TVDTSGSVTEDVNVLAGMLSDSGALSFSDVDVNDSHSVSSLYNNDISWSGGALTQDQINA
LVAGFSADSDSWDYSIANSLVQFLAVGETITLSFNVSVDDGHGGIDTETVTITINGTNDA
PVLTVDTSGSVTEDVNVLAGMLSDSGTLSFSDVDVNDSHSVSSLYNNDISWSGGALTQDQ
INALVAGFSADSDSWDYSIANSLVQFLGVGETITLSFNVSVDDGHGGIDTETVTITINGT
NDAPVLTVDTSGSVTEDVNVLAGMLSDSGTLSFSDVDVNDSHSVSSLYNGDISWSGGALT
QDQINALVAGFSADSDSWDYSIANSLVQFLAVGETITLSFNISVDDGHGGIDTDTVTITI
NGTNDAPVLTVDTSGSVTEDVNVLAGMLSDSGTLSFTDVDVNDSHSVSSLYNGDISWSGG
ALTQDQINALVAGFSADSDSWDYSIANSLVQFLAVGETITLSFNVSVDDGHGGIDTDTVT
ITINGTNDAPVLTVDTSGSVTEDVDVLAGMLSDSGALSFTDVDVNDSHSVSSLYNGDISW
SGGALTQDQINALVAGFSADSDSWDYSIANSLVQFLAVGETITLSFNVSVDDGHGGIDTD
TVTITINGTNDAPVLTVDTSGSVTEDVNVLAGMLSDSGALSFSDVDVNDSHSVSSLYNGD
ISWSGGALTQDQINALVAGFSADSDSWDYSIVNSLVQFLAVGETITLSFNVSVDDGHGGI
DTETVTITINGTNDAPVLTVDTSGSVTEDVNVLAGMLSDSGALSFSDVDVNDSHSVSSLY
NNDISWSGGALTQDQINALVAGFSADSDSWDYSIANSLVQFLAVGETITLSFNVSVDDGH
GGIDTETVTITINGTNDAPVLTVDTSGSVTEDVNVLAGMLSDSGTLSFSDVDVNDSHSVS
SLYNNDISWSGGALTQDQINALVAGFSADSDSWDYSIANSLVQFLGVGETITLSFNVSVD
DGHGGIDTETVTITINGTNDAPVLTVDTSGSVTEDVNVLAGMLSDSGTLSFSDVDVNDSH
SVSSLYNGDISWSGGALTQDQINALVAGFSADSDSWDYSIANSLVQFLAVGETITLSFNV
SVDDGHGGIDTETVTITINGTNDAPVLTVDTSGSVTEDVNVLAGMLSDSGTLSFSDVDVN
DSHSVSSLYNGDISWSGGALTQDQINALVAGFNLVNGGWTYSIDNDLIQFLAEGETITLS
FDVTVDDGNGGTDTKTVSITINGTNDAVEGEFAKEIWVPASMAELLNPYDDGYPLHIAVP
TDTDVNDTISITNISMAFVDQNVVADIGTLWYVDDDTNLLTQFDFDNPVSLSAAELGTLV
YMPGDNGDLDSQLDISLTFTVNSGAEQVQGDFVIHTVPQNSLGDNSVLIGDGSSPLTSGN
DQDAYLTVSSGFAEVLNTDPSLGTLDLFTDFQKSPFDIPIPAGEIGGVTGQEREDEVSVR
LTINGITFIVIAAANGVTDWTFDVDSGLMKASVAYDSILMESDLSTTLAQYLAANPVSAG
DIWTITYLDNDGGSYQARFVQATFTHELLPDTAITVTGTDNVDNLIFGTTEGDILTGANL
NDEIVGREGNDIIKGLAGDDELLGGSGNDTIEGGTGADYLIGGLGSDSLDAGIDTDRDIL
VWDTGSADGSTDDVYHFDPDHDALDLSDILLDEENGSLEDYLSFSFGGGDTTITIDSNGA
APGGDTVTIVLHGTDLSAIYGSANETDIIQGMLGDNALLVTQPPAPPILPEANHVVLQDE
HSIP
NT seq
9015 nt
NT seq
+upstream
nt +downstream
nt
atgggcattgcaatcaaccaacaggatgcagttgtcacccagatagttggccagctaagg
gccaaggatgagcaaggcaacgttcgcacattaaatattggtgacatcatccaccagggg
gagcaattgatatttgcttccgatgataagtttgtcattgagtatgcagacggcacccgc
atgagcgaagtgaacatgcagtctcaggcacaaacaacgccagcctcaacgcagatgcca
gatctgcctgctgacgccacagatgcggagatagccgccctgcaggcccagatattggca
ggccaggatccgacagctgatttacctgaaaccgcagccggtgccggcggtggtggaacc
gagggtggattcgactacaccagtgtcggccgtgatggtgccgaaaccctcgccagtgca
ggatgggataccacagggttcacaactacgacgctgaccgcccagcaagaacctctgctg
accgatatactccccgaagccccattcctcgccaatgccaatctcaccttctccgatgct
gccttacccctggggtctaccccggatgcccaacaggttacccaagatggcaccctggcc
ttcagtgccacttccggtgtactgaacatcagcattgacggagtggccattgtgaccgat
ggcatattcaatggacctgtgactatcagcacctcttatggggtgctgactatttccggg
gtagatctggcaaacggtattttgagcttcagctttacccaaactgccgccgtcgatcac
agccagggggacatattcaaccagttgttctcacttctgctgaccgacaatcttggcgtc
accacctcaagcaccctcaccatcagcgtcggtgacgatgctcccagcggccagaatgac
agcaacagcctgtcagaagataccagtctggcggtgatcggcaacctgctcgccaacgac
acccagggcgctgatacggcccaggttaccgcggccggcgccggaagtgccaccaacatc
agtgtgggccaggccagccaaatcaatggcagttttggcgtactgacactcaatagcgat
ggcagttacagctatcaattgaataccggtttgcaagcagtgcaggccctggctcagggc
cagaccctgaatgaggtcttcagctacgtgttgcaggacgccgatggcgatatcagtgtc
caaaccctgaccataaccatcaccggcagcaacgatgcccccgtcattaccacggagcaa
ggtcaggatctgggtacagtaatagaagccggtaacttcgacgatggctccttcaatccc
ggcgtcccctcggtcagcggtaacctcagcgccagcgacgtggacaatggtgcagtgctg
acctggagcggaaatgctgacagtcccttcggcagtttcagcatagatgcggccacagga
gcctggacctatgtcctcgataacagcgccgccgacagtctgcaggaaggagaggtgcgc
attgaaactttcctcgtcactgtaaccgatgaatttggcgccactgccactcaggaagtg
accatcaccatagtcggcagcaacgatgcgccgatattgagcgccgagaccagtggcagc
gtcaccgaagatcaaaatgtctctgccggcatgctggttgacagcggcgccctcagcttc
accgatgtggatctgggcgacgaccatcagatgagcagtagctataacggcgatatcagc
tggagcggtggcagtctgacccaggatcagatcaatgccctgctggccggtttcagtgtc
gacagcaacagctgggactacagcatcgccaacagcctggtgcagttcctgtccgtcggt
gaaaccattaccctcagctttactgtcaccgtcacagatgaattcggtgccagcgacagc
caggtagtcactctgaccatccatggcaccaatgatgcccccgtcattaccacggagcaa
ggtcaggctctgggcacagtaatagaagccggtaacttcgacgatggctccttcaatccc
ggcgtcccctccgtcagcggtaacctcagcgccagcgacgtggacaacggtgcagtgctg
acctggagcggaaatgctgacagtcccttcggcagtttcagcatagatgcggccacagga
gcctggacctatgtcctcgataacagcgccgccgacagtctgcaggaaggagaggtgcgc
attgaaaccttcctcgttactgtgaccgatgaatttggcgccactgccactcaggaagtg
accatcaccatagtcggcagcaacgatgcgccgatattgagcgccgagaccagtggcagc
gtcaccgaagatcaaaatgtctcagccggtatgctggttgacagcggcgccctcagcttc
accgatgtagatctgggcgacgaccatcagatgagcagtagctataacggcgatatcaac
tggagcggtggcagtctgacccaggatcagatcaatgctctgctggccggtttcagtgtc
gacagcaacagctgggactacagcatcgccaacagcctggtgcaattcctgtcgataggc
gaaaccattaccctcagctttactgtcaccgtcacagatgaattcggtgccagcgacagc
caggtagtcaccctgaccatccacggcaccaatgacgggcctgtcatcaatccccctgca
gaaggcgatgccgatggcactgttatagaagcgggtaactttgataacggcaatgtcgat
cccggttctcccgaaatctccggtaccctgacggccacagatgcggatcatgatgccgta
ttgacctggagtggcaatgccgagggtgagttcggtgactttgttatagatcccgaaacc
ggcacctggacctatacaatcgataacagcgctgccgacagtttgcaggaaggcgaaacc
cgtaccgaaaccttcctggtcacagtcacagaccaaaatggcgcaaccagcacacaggaa
gtgaccatcaccatagtcggcagcaacgatgcaccgatattgaccctggatgacagtggc
agtgtgattgaagatgtcgatgtcgtcgccggtatgctgtccgacagtggcgccctcagc
tttaccgatgtcgacgtgggagacagtcacgagatcagcaccagttacaatggcgacatc
agttggagtggtggcgccctcaccctggcagaaattaatgccctggtggcgggcttcagt
gccgacagcgacagctgggacttcaatatagccaacagcctggtgcagttcctggcggtg
ggtgagaccattaccttaagctttaccgtcactgtgaccgacgaatttggcgccagtgac
agtcaacaggtaaatatcactatcacaggcaccaacgatgcaccggtactgaccgtcgat
accagcggcagcgtcaccgaggatgtcaacgtgctcgccggcatgctgtccgacagcggc
accctcagctttagcgacgtcgatgtcaacgacagccacagcgtcagctcgctgtacaac
aatgacatcagctggagcggcggcgccctgacccaggaccaaatcaatgccctggtggcc
ggcttcagtgccgacagcgacagctgggactacagcatcgccaacagcctggtgcagttc
ctggcggtgggtgagaccatcaccttaagcttcaacgtcagcgtcgatgacggtcatggc
ggtattgataccgagaccgtgaccatcaccatcaacggcaccaacgatgcaccggtactg
acggtggataccagcggcagcgtcaccgaggatgtcaacgtgctcgccggcatgctgtcc
gacagcggcgccctcagctttagcgacgtcgatgtcaacgacagccacagcgtcagctcg
ctgtacaacaatgacatcagctggagcggcggcgccctgacccaggaccaaatcaatgcc
ctggtggccggcttcagtgccgacagcgacagctgggactacagcatcgccaacagcctg
gtgcagttcctggcggtgggtgagaccatcaccttgagcttcaacgtcagcgtcgatgac
ggccatggcggtattgataccgagaccgtgaccatcaccatcaacggcaccaacgatgca
ccggtactgaccgtcgataccagcggcagcgtcaccgaggatgtcaacgtgctcgccggc
atgctgtccgacagcggcaccctcagctttagcgacgtcgatgtcaacgacagccacagc
gtcagctcgctgtacaacaatgacatcagctggagcggcggcgccctgacccaggaccaa
atcaatgccctggtggccggcttcagtgccgacagcgacagctgggactacagcatcgcc
aacagcctggtgcagttcctgggggtgggtgagaccatcaccttgagcttcaacgtcagc
gtcgatgacggccatggcggtattgataccgagaccgtgaccatcaccatcaacggcacc
aacgatgcaccggtactgacggtggataccagcggcagcgtcaccgaggatgtcaacgtg
ctcgccggcatgctgtccgacagcggcactctcagctttagcgacgtggatgtcaacgac
agccacagcgtcagctcgctgtacaacggcgacatcagctggagcggcggcgccctgacc
caggaccaaatcaatgccctggtggccggcttcagtgccgacagcgacagctgggactac
agcattgccaacagcctggtgcagttcctggcggtcggtgaaaccatcaccttgagcttc
aacatcagcgtcgatgacggccatggcggtatcgataccgacaccgtcaccatcaccatc
aacggcaccaacgatgcaccggtactgaccgtcgataccagcggcagcgtcaccgaggat
gtcaacgtgctcgccggcatgctctccgacagcggcaccctcagttttaccgacgtggat
gtcaacgacagccacagcgtcagctcactctacaacggtgacatcagctggagcggcggc
gccctgacccaggaccaaatcaatgccctggtggccggcttcagtgccgacagcgacagc
tgggactacagcattgccaacagcctggtgcagttcctggcggtcggtgaaaccatcacc
ttaagcttcaacgtcagcgtcgatgacggccatggcggtatcgataccgacaccgtcacc
atcaccatcaacggcaccaacgatgcaccggtactgaccgtcgataccagcggcagcgtc
accgaggatgtcgacgtgctcgccggcatgctctccgacagcggcgccctcagctttacc
gacgtcgatgtcaacgacagccacagcgtcagctcactctacaacggtgacatcagctgg
agcggcggcgccctgacccaggaccaaatcaatgccctggtggccggcttcagtgccgac
agcgacagctgggactacagcattgccaacagcctggtgcagttcctggcggtcggtgaa
accatcaccttaagcttcaacgtcagcgtcgatgacggccatggcggtatcgataccgac
accgtcaccatcaccatcaacggcaccaacgatgcaccggtactgaccgtcgataccagc
ggcagcgtcaccgaggatgtcaacgtgctcgccggcatgctgtccgacagcggcgccctc
agctttagcgacgtcgatgtcaacgacagccacagcgtcagctcactgtacaacggtgac
atcagctggagcggcggcgccctgacccaggaccaaatcaatgccctggtggccggcttc
agtgccgacagcgacagctgggactacagcattgtcaacagcctggtgcagttcctggcg
gtgggtgagaccatcaccttaagcttcaacgtcagcgtcgatgacggtcatggcggtatt
gataccgagaccgtgaccatcaccatcaacggcaccaacgatgcaccggtactgacggtg
gataccagcggcagcgtcaccgaggatgtcaacgtgctcgccggcatgctgtccgacagc
ggcgccctcagctttagcgacgtcgatgtcaacgacagccacagcgtcagctcgctgtac
aacaatgacatcagctggagcggcggcgccctgacccaggaccaaatcaatgccctggtg
gccggcttcagtgccgacagcgacagctgggactacagcatcgccaacagcctggtgcag
ttcctggcggtgggtgagaccatcaccttgagcttcaacgtcagcgtcgatgacggccat
ggcggtattgataccgagaccgtgaccatcaccatcaacggcaccaacgatgcaccggta
ctgaccgtcgataccagcggcagcgtcaccgaggatgtcaacgtgctcgccggcatgctg
tccgacagcggcaccctcagctttagcgacgtcgatgtcaacgacagccacagcgtcagc
tcgctgtacaacaatgacatcagctggagcggcggcgccctgacccaggaccaaatcaat
gccctggtggccggcttcagtgccgacagcgacagctgggactacagcatcgccaacagc
ctggtgcagttcctgggggtgggtgagaccatcaccttgagcttcaacgtcagcgtcgat
gacggccatggcggtattgataccgagaccgtgaccatcaccatcaacggcaccaacgat
gcaccggtactgacggtggataccagcggcagcgtcaccgaggatgtcaacgtgctcgcc
ggcatgctgtccgacagcggcactctcagctttagcgacgtggatgtcaacgacagccac
agcgtcagctcgctgtacaacggcgacatcagctggagtggcggcgccctgacccaggac
caaatcaatgccctggtggccggcttcagtgccgacagcgacagctgggactacagcatc
gccaacagcctggtgcagttcctggcggtgggtgagaccatcaccttaagcttcaacgtc
agcgtcgatgacggtcatggcggtattgataccgagaccgtgaccatcaccatcaacggc
accaacgatgcaccggtactgacggtggataccagcggcagcgtcaccgaggatgtcaac
gtgctcgccggcatgctgtccgacagcggcactctcagctttagcgacgtcgatgtcaac
gacagccacagcgtcagctcgctgtacaacggcgacatcagctggagtggcggcgccctg
acccaggaccaaatcaatgccctggtggccggctttaacctggttaatggcggttggacc
tacagcatcgacaatgaccttattcaattcctggccgagggggaaaccattaccctcagc
ttcgatgtcacggtggatgatggaaacggaggcacagacaccaaaacggtttccatcacc
atcaatggcaccaatgatgctgtagagggtgagttcgccaaggaaatctgggtaccggcc
tccatggccgaactgctcaacccctatgacgacggttacccactgcacattgccgtgccc
acagacacagatgttaacgacaccatcagcattaccaatataagcatggcctttgtggat
caaaacgtggtcgcagacataggtaccctctggtatgtggatgatgataccaatctgttg
acccaatttgactttgacaacccggtcagcctgtccgccgcggaattgggcaccttggtt
tacatgccgggtgacaacggcgatttagacagtcagctggatatttcactcaccttcacg
gtcaattcgggcgctgagcaggtgcagggtgactttgttatccataccgtgccgcaaaat
agccttggcgataacagtgttctgatcggcgacggcagttcaccactcacctcgggtaac
gatcaggatgcttacttaaccgtcagcagtggtttcgccgaagtgcttaataccgatccc
agtttgggtaccctggatctctttaccgacttccagaaatcgcccttcgatatcccaatt
ccggccggtgagataggtggagtcactggccaggaaagggaagacgaagtctcggtccgg
ctcaccatcaatggcatcacctttattgtcattgccgctgcaaacggggtgacagattgg
acctttgatgtggattcaggtctgatgaaggccagcgtggcctacgacagcatattaatg
gaatctgatctatccaccacccttgcccaatacctggcagccaatccggtatccgcggga
gacatttggaccatcacctatctggataacgatggcggctcgtaccaagcccgctttgtt
caggcgacctttacccatgaactcttgcccgataccgctattactgtcacaggcacagac
aatgtcgataacttgattttcggcaccactgaaggagatatactgacgggggccaatctg
aacgatgaaattgttggccgggaaggtaacgatatcatcaaaggactggcaggtgatgac
gagctgctgggcggtagcggaaacgacaccatagaaggcggcacaggtgccgattacctg
attggcggtctgggcagcgacagtctggatgcggggatagacacagacagagatatattg
gtgtgggatacaggttcagccgatggcagtaccgatgatgtctaccatttcgaccccgat
catgatgctttggatttatcagatattctgcttgatgaagaaaacggcagcttggaagat
tacctcagcttcagcttcggaggcggcgataccaccatcaccattgatagcaacggtgca
gcccccggcggggatactgtcacaatagtcctgcatggcacggatttgtcggctatctat
ggttctgccaacgaaaccgacattatccagggcatgctgggtgataacgcccttctggtc
acacaaccgccagccccccccatactgccagaagcaaatcatgtagtgctccaggacgag
cacagcatcccctaa
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