Shewanella cyperi: JYB88_16515
Help
Entry
JYB88_16515 CDS
T07829
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
scyp
Shewanella cyperi
Pathway
scyp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JYB88_16515
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyp02000
]
JYB88_16515
02044 Secretion system [BR:
scyp02044
]
JYB88_16515
Transporters [BR:
scyp02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
JYB88_16515
Secretion system [BR:
scyp02044
]
Type I secretion system
Adhesin protein transporter
JYB88_16515
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
Peptidase_C39
AAA_13
AAA_15
AAA_29
MMR_HSR1
DUF87
AAA_22
AAA_23
nSTAND3
NACHT
Motif
Other DBs
NCBI-ProteinID:
QSX29770
UniProt:
A0A974XJX5
LinkDB
All DBs
Position
3735229..3737406
Genome browser
AA seq
725 aa
AA seq
DB search
MSLTASEKQEQWTISASTRVTVDPLLDSLVLLTEYFGSPCSSDSLAAGLPISGALLTPDL
LPQAAARAGLTARLTRKGLDQVSAIMLPCILLLKDKKACLLRKLDHENDTAVIQLPETGG
EETLSIEALEALYVGYLFLVKQQYRGDMGFDVYRHDHKHHWLLQTLKDATPIYRDVLIAS
ILVNLFALVSPLFIMNVYDKVVPNLAFESLWVLAIGASIAYIFDLIMRQLRSYLIDVAGK
KVDIIVSSRLFAKAIGIPLAKRSPSVGGMAKQLGEFDSIRDILTSATITTLVDLPFALFF
LLIIYIVSGDLALVPLFGGLIIIGYTLYVQPKLKAAIEESNKFSSLKHGHLIESLAALES
IKAYGAEGLVQKSWQQMIGHTATWQLKSKKLTNAVANTANFMVQLTVVSVVILGVYRVAE
NEISMGGIIAAVMLSSRAISPMAQLANLLTRGNHTASALRQLDGIMTQEDEFENKGHLVS
KQRLLGKIEADHVGFNYPGSEKPVLHPCSISIQPGERVAIIGRNGSGKSTLAKLLVGLYQ
PTKGSLRYDGLDSAQIHPSDLRRNFGYLPQDVVLFHGSIRDNILFGTRQVSEHQLIRAVQ
LSGVSLFTNLESEGLDQQVGEGGQALSRGQRQTVALARATLNDPPILLMDEPTASLDARA
EKQFIRAMENVSKDRTLLLITHKMHLLKLVDRIIVLERGHVLADGPKAEVLEKLSLGLLA
GGQKP
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
gtgtctctcactgcctctgaaaagcaggagcaatggactatctctgcctccactcgggtc
acagttgatcccttactcgatagtctcgtactcctgactgaatattttggaagcccctgt
tccagcgactcgctggcggccggcttgcccattagcggcgccctgttgacgcctgactta
ctcccccaggcagcagccagggcgggcttgactgcgcgtctgactcgcaaggggttggat
caggtgtcagcgatcatgctgccctgcatcctgctgctgaaagacaagaaagcctgtttg
ctgcgcaaattggatcatgaaaatgacactgccgtgattcagcttcctgaaaccggtggc
gaagaaaccctgtccatcgaggcattggaagccctgtatgtgggttacctgtttctggtc
aagcagcagtaccgtggtgacatgggattcgacgtctatcgtcacgaccacaaacatcat
tggttattgcagaccctgaaggatgccacccccatctaccgggatgtgttgatcgcctcc
atcctggttaacctgttcgccctggtgtcaccgctgttcatcatgaacgtctacgacaag
gtggtgcctaacctggctttcgaatctctctgggtgttggctatcggagcctcgatagcc
tatatatttgacttaatcatgcggcaactcaggagctacctgattgacgtggcagggaaa
aaagtcgacatcatagtctcatccaggctgtttgccaaagccattggtataccgctggcc
aagcgctctcccagcgtcggtggcatggccaaacagctgggtgaattcgacagcataaga
gacattcttacttcggctaccatcaccaccctggtggatctgccctttgcgctatttttc
ctgttaatcatttacatagtatcgggtgatctggccttggtgcctctgtttggcggtttg
atcatcataggttacaccctgtatgtgcagcccaaactcaaggccgccattgaagaaagc
aacaaattctccagcctcaaacacggccacctgatcgaaagtttggcggcactggaatcc
atcaaggcctacggtgccgagggtttggtgcagaaatcctggcaacagatgattggccat
acagccacctggcagcttaaatcaaaaaagttaaccaatgccgtggccaataccgccaac
tttatggtgcaactgacagtggtcagcgtagtgatccttggggtttaccgggtcgcagag
aatgagatctccatgggtggcatcatagccgccgtcatgctctccagccgtgccatttca
cccatggcgcaactggcaaacttgcttacccgcggtaaccataccgccagcgccctgcgt
cagctggacggcatcatgacccaggaagacgaattcgagaacaagggtcacttggtcagt
aagcaaagactgctcggcaagatagaagccgaccatgtgggctttaattaccccggctcc
gaaaaacctgtgctgcacccttgcagcatcagcatacagcccggcgagcgggtggccatc
attggccgaaacggcagtggcaaaagtaccctggccaagctgctggttggattgtaccag
cccaccaagggcagcctgcgctacgacggcctggacagtgcccagatccaccccagcgat
ctgaggcgcaatttcggttacctgccccaggatgtggtcctgttccacggcagcatacgc
gacaatatattgttcggcacccgccaggtgtcagaacatcagttgatacgggcagtgcaa
ttgtccggggtcagcctattcaccaacctcgagtcagaggggctcgaccagcaggtgggc
gaaggcggtcaagccctgtcacggggccagcgtcagaccgtggctttggcccgcgcgaca
cttaacgacccgccgatcctgttgatggatgaacccacggccagtttagatgcccgagcc
gagaagcaatttatccgtgccatggagaacgtctccaaggaccgaaccctgctgctcatc
acccacaagatgcacctgctgaaactggtggatcgcatcatagtgctggaacgcggccat
gtactggccgatggccccaaggccgaggtgctggaaaaactcagccttggtttgctggcc
ggagggcagaagccatga
DBGET
integrated database retrieval system
