Shewanella cyperi: JYB88_16825
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Entry
JYB88_16825 CDS
T07829
Name
(GenBank) sodium:proton antiporter
KO
K18218
tetracycline resistance efflux pump
Organism
scyp
Shewanella cyperi
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyp02000
]
JYB88_16825
01504 Antimicrobial resistance genes [BR:
scyp01504
]
JYB88_16825
Transporters [BR:
scyp02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JYB88_16825
Antimicrobial resistance genes [BR:
scyp01504
]
Gene variants
Tetracycline resistance genes
Transporters
JYB88_16825
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_H_antiporter
Motif
Other DBs
NCBI-ProteinID:
QSX29824
UniProt:
A0A974XK16
LinkDB
All DBs
Position
complement(3805666..3807135)
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AA seq
489 aa
AA seq
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MDISATHLLPLLLTLILALVLRRTLLALGIGVLASAAMLSDYAPLATLAYLGDSLGGQFY
LDGWQSWHLNVLAAMMLLGVMTELLARGGAVAAFGHWLERRIRDGRSARLGIMLLGWLVF
IDGIFSCLAVGHISRPIAERYGLPKGQAAYLVDASASPLCSLVPFSSWGPYVMALLAAIS
FLPLPPLAAFLEIARHNLYAICTLVLLALVAWGNWGWPEAQARPTDGELRRGSPWQLLLP
LLTLLTAAVILTLYSGAQQGGGLAQWLANADIGTAMRDAALLACLVALLLSAVGGRKVGQ
LLGDLLHGLRNISLAIAILLLTWMTGKAIADLGVAKLLAETAELWLSPRFLLPGIFVLCA
LMAFATGTSWGTFAIMIPICAEIAHSLAPELLLPALSAVMAGSVFGDHCSPISDTSILSA
TASGCEVQQHVLTQLPFAMMAALASLGGYVLFNLGLGYGWGLLLALGLLPVMLALLRRLT
RPNYRVIGQ
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggacatttccgccacccatttactgcccctgttgttgaccctgatacttgccctggtg
ttgcggcgaaccctgttggccctggggattggggtgctggccagcgccgccatgctcagt
gattatgcgccgctggccactctggcctatttgggggacagcctgggtgggcaattctac
cttgatggctggcaaagttggcacctgaatgtgttggccgccatgatgctgctgggggtg
atgaccgaactgttggcccgtggcggtgccgtggctgcttttgggcattggctggagcga
cgcattcgtgatggtcgcagcgcccgcttggggatcatgctgctgggttggctggtcttt
atcgacggcattttcagttgcctggcggtgggccacatcagccgtcccattgccgaacgt
tacggtctgccaaaggggcaggcggcttacctggtggatgccagtgcctcgcccctgtgt
tcactggtacccttttccagttggggcccctatgtgatggcactgctggcagccatcagt
ttcctgccattgccgccactggcggcctttctcgagatagcacgccataacctctatgcc
atttgcaccctggtgttgctggcgctggtggcctggggcaattggggttggccagaggcc
caggccaggccaacggatggggagctgcgccggggcagcccctggcaactgctgttgccc
ttactgactttgctgacggccgccgtcattctgaccctgtattcgggcgctcagcaaggg
gggggcctggcccagtggcttgccaatgccgacataggcacagccatgcgggatgcggcc
ttgctggcctgcctggtggccttgctgctgtctgccgtcgggggccgtaaagtcgggcaa
ttgcttggcgatctgctccatgggctgcgcaatatttccctcgccatcgccatactgctg
ctgacctggatgacgggcaaggcgatcgcggatctcggggtggcaaagttgctggccgaa
actgcggaactctggttgtcgccccgcttcctgctaccggggatctttgtgctgtgtgcc
ttgatggccttcgccaccggcaccagctggggcacctttgccatcatgatccccatctgt
gccgagatagcccactccctggcgccggaactgttgttgccggccctcagcgccgtgatg
gccggctcagtgttcggcgatcattgttcgccgatttccgataccagtattctcagtgcc
accgccagtggctgcgaggtgcagcagcacgtgctgacccagttgccctttgccatgatg
gcggcactggccagtctggggggatatgttttattcaatttggggctgggctatggctgg
gggctgttgttggccctgggactcttgcctgtcatgctggcgctgctgcgccggctgacc
cgcccaaactatagggtcatcggccaatag
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