Shewanella cyperi: JYB88_17260
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Entry
JYB88_17260 CDS
T07829
Name
(GenBank) Lrp/AsnC family transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
scyp
Shewanella cyperi
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scyp03000
]
JYB88_17260
03036 Chromosome and associated proteins [BR:
scyp03036
]
JYB88_17260
Transcription factors [BR:
scyp03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
JYB88_17260
Chromosome and associated proteins [BR:
scyp03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
JYB88_17260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
MarR
HTH_11
HTH_27
HTH_DeoR
HTH_20
DDRGK
NirdL-like_HTH
HTH_Crp_2
HVO_A0114
DUF6159
HTH_PafC
Rrf2
DnaD_N
HxlR
Motif
Other DBs
NCBI-ProteinID:
QSX29903
UniProt:
A0A974XMD5
LinkDB
All DBs
Position
3894641..3895102
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AA seq
153 aa
AA seq
DB search
MDKKDLAIIDRLQRDGRISISELAASLNMSDTPCIRRIRKLEQDGVISGYAAQLDPHKAG
FNVIVYAAIRLSENSDTAAERFETAVAKLPEVMECSVITGSHDYLLKIVARDLPAYERFV
KKSLGSLPAIAGIESTLVLKQTFSRTALPLSAN
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atggataagaaagacctcgccatcatagacagattgcaacgtgatggccgcatcagtatc
agcgagctggcggccagcctgaatatgtccgacaccccctgcattcgccgcatccgcaag
ctggagcaggatggggtgatcagcggttacgccgcccaactggacccgcataaggccggt
tttaatgtcattgtttacgctgctatccgtctgagcgagaactcggataccgccgccgag
cgcttcgagaccgcggttgccaaattgccggaagtgatggaatgctcggtgatcaccggc
tcccacgactatctgctgaaaattgttgcccgggatctgccggcctacgagcgctttgtg
aaaaaatccctcggtagcctgcctgccatagcgggcatcgaatccaccctggtgctgaaa
caaaccttcagccgtaccgccctgccgctcagcgccaattga
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