Shewanella cyperi: JYB88_18105
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Entry
JYB88_18105 CDS
T07829
Symbol
rlmF
Name
(GenBank) 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF
KO
K06970
23S rRNA (adenine1618-N6)-methyltransferase [EC:
2.1.1.181
]
Organism
scyp
Shewanella cyperi
Brite
KEGG Orthology (KO) [BR:
scyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scyp03009
]
JYB88_18105 (rlmF)
Enzymes [BR:
scyp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.181 23S rRNA (adenine1618-N6)-methyltransferase
JYB88_18105 (rlmF)
Ribosome biogenesis [BR:
scyp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JYB88_18105 (rlmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_10
MTS
Methyltransf_25
Methyltransf_12
Methyltransf_23
PrmA
Motif
Other DBs
NCBI-ProteinID:
QSX30061
UniProt:
A0A975AKT3
LinkDB
All DBs
Position
complement(4077998..4078906)
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AA seq
302 aa
AA seq
DB search
MSINKSRAGKPGQAKGKGLHPRNAHNGGYDFPALCRAEPGLRAFLLTAKSGQSSIDFADP
RAVKCLNKALLKQHYGIVGWDIPKGYLCPPVPGRVDYVHYLADLLPKGTPNRVLDIGTGA
NGIYALLGASLYQWQLVATDIEPRSLANVRDILAYNPLLAERIDLRLQSNPTQIFANVAA
DDEHFDACMCNPPFHGSQAEASAGSKRKLQNLTGRPVEQVKLNFGGQHNELWCDGGERRF
LFAMIDESAARPQLCHWFTSLVSKGDNLRPCKRRLQALGATEVRVIEMTQGNKQTRILAW
RF
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcaacaaaagtcgtgcaggtaagcctggccaagcaaaaggcaagggcctgcat
ccacgcaacgcccacaacggtggctatgactttcccgcgctgtgccgggccgagcccggt
ctccgggcgtttctgctcacggccaagtcgggccagagcagtatcgactttgccgatccc
agagccgttaagtgtctcaacaaggctctgctaaaacagcactatggcattgttggctgg
gacattcccaaaggctatttatgcccgccggtccccgggcgggttgattatgtgcattac
ttggcggacttgttgccaaaaggcacgccaaaccgggtgctggatataggtacgggggcc
aatggcatctatgccctgcttggtgccagtctctaccagtggcagctggtggccacggac
atagaaccccgctccctggccaatgtccgggacatactggcgtataatcccttgctcgcc
gagcgcattgacctgagattgcaatccaatccaacccaaatctttgccaatgtggccgcg
gacgatgagcattttgatgcctgcatgtgtaacccgccattccatggttcacaggccgag
gccagtgcaggcagcaagcgcaaattgcaaaatctgactggcaggccggtggaacaagtc
aaactcaattttggtggtcaacacaatgagctgtggtgtgatggtggcgaacgtcgtttt
ctgtttgccatgattgatgaaagtgcggccaggccacagctgtgccattggttcacctct
ttggtttccaaaggtgacaatctgaggccctgtaaacgccgtctgcaggcattgggagcg
actgaggtgcgggtgatagagatgacccagggcaataagcagacccggatacttgcctgg
cgtttttaa
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