KEGG   Kalymmatonema gypsitolerans: NIES4073_04110
Entry
NIES4073_04110    CDS       T10147                                 
Name
(GenBank) DEAD/DEAH box helicase domain-containing protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
scys  Kalymmatonema gypsitolerans
Brite
KEGG Orthology (KO) [BR:scys00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:scys03400]
    NIES4073_04110
Enzymes [BR:scys01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     NIES4073_04110
    5.6.2.6  RNA 3'-5' helicase
     NIES4073_04110
DNA repair and recombination proteins [BR:scys03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    NIES4073_04110
SSDB
Motif
Pfam: DEAD Helicase_C ResIII WHD_Lhr Cas3-like_C_2 HTH_19
Other DBs
NCBI-ProteinID: BAZ19539
LinkDB
Position
26966..29176
AA seq 736 aa
MTNAAFSRLAPFIQEYIYNHNWTELRAVQIEACKVIFDTDAHLLVAAGTASGKTEAAFLP
VLTLLHENPSNTIGALYIGPIKALINDQFERLNDLLREADIPVCHWHGDVSQSHKMKLLK
NPQGILQITPESLESLLINKHHELVRLFGDLRFVIIDEIHAFMGSERGCQILCQLARLAR
VTQRQPRRIGLSATLGDYSLAEEWLRSGTDKLVITPKIEGGKRQIRLAVEHFYVSETNRQ
SAKDAERGKEEREGGISAYDRYIFNLSKSRKCLIFANNKSQTESVIACLRQVAGVEGYPD
IYHVHHGSISASLRQAAEAAMRELNHPAVTAATLTLELGIDIGYLERVIQLESPFSVASF
LQRLGRTGRRGEAADMRFLCVEEEVSPEASLPEQIPWQLLQCIAIIQLYLEERWIEPIKP
LKYPLSLLYHQTMSILVATGELSPAALAKQVLSLPTFAAISQEDFKFLLRYLIDIDHIYL
TEQGKLIIGFAGEKVVGRFQFYAVFPDNQEYVVKQGTTEIGSIVTPSPVGHSFALAGKTW
EVVDVDFKRKVILVKQVDGKASIYWRGGSGIIHTRILQRMRQALFEDVDYSYLQNNALKR
LQSVRELARDAGLDKRNILQLEKGKCWIFPWMGTVAYRTLERLLNRFCRESLEISGISGD
NPYFLTIKLPPKKAEYLYSEILSLCEQRIKNEDLLNDAEAPQLEKYDEFIPYPLLRKAFA
SNHLDMSELRQQVALW
NT seq 2211 nt   +upstreamnt  +downstreamnt
atgaccaatgctgcattttccagactcgccccttttattcaagaatatatttacaatcac
aattggactgaattaagagcagttcaaatcgaagcttgtaaagttatttttgacactgat
gctcatttgctagttgctgctgggactgcttcagggaaaacagaagcagcttttttacca
gttttgactttattacatgaaaatccttctaatacaattggcgcactttatattggtcct
attaaagctttaattaatgaccaatttgaacgtctgaatgatttgttgagagaggcggat
atcccagtttgtcattggcacggtgatgttagccaaagtcataaaatgaagcttcttaag
aatcctcaggggattttacaaattacgccggaatctttagaaagtttgttaattaataaa
catcatgagttagtgcgtttgtttggtgatttgcggtttgtcatcattgatgaaattcac
gcttttatgggttcggaacggggttgtcagattctttgtcaattggcacggttggcaagg
gtgacgcaaagacaacctagaagaattggtttatcggcgactctcggtgattactcattg
gctgaggagtggttgcgttctgggactgataagttggtgataactccaaagattgaggga
gggaagcgtcaaattagacttgctgtggagcatttttatgtttctgaaacgaaccgccaa
agcgctaaggacgcagagagaggaaaagaggagagagaaggaggtataagtgcatatgat
agatatatttttaatctaagtaagtctcgtaagtgtcttatttttgctaataataaatcg
caaacggaatctgttattgcttgtttgcgtcaagttgctggtgttgaggggtatccagat
atttatcatgtgcatcatggcagtatctctgcctctttgcgtcaagcggctgaagctgct
atgcgtgaactcaatcatccagcggtgactgctgctacgttgactttggaattgggtata
gatattggttatttggagcgagttattcagttagaatcgcctttttctgttgctagcttt
ttacagcgcttaggacgtactggaagaagaggtgaagcggctgatatgcggtttctttgt
gttgaggaggaggtatctcctgaagcatcgttaccggaacaaattccttggcaacttttg
caatgtattgcgattattcaactttatttggaggagcgttggattgaaccgataaagcct
ttaaaatatcctttgagtttgctttatcatcagacgatgagcattttagtagcaacaggg
gaactttcacctgctgcccttgctaaacaggttttaagtctgccaacttttgctgctatt
tctcaagaagattttaagtttttgctacgttatttaattgatattgaccatatttaccta
accgagcaaggtaagttaattattggttttgcaggggaaaaagtggtaggaagatttcag
ttttatgctgtctttcctgataatcaggagtatgttgttaagcaaggaacgacagaaatt
ggcagtattgttacgccgtctcctgtggggcattcatttgcattggcagggaaaacttgg
gaagttgtagatgttgattttaaaagaaaggttattttggtgaagcaggtagacggtaaa
gctagtatttattggcggggtggtagtggcatcattcatacaagaattttgcaacgaatg
cgacaagccctgtttgaggatgtagactatagttacttacaaaataatgctttaaagcgt
ttgcaatcagttcgtgaattagcaagagatgctggactagataaacgtaatattttgcag
ttagaaaaaggtaagtgctggatatttccttggatgggtactgtcgcttaccgtacttta
gaaaggttgcttaaccgcttttgccgcgaatctttggaaattagcgggatcagtggcgat
aatccttattttttgactattaaattacctccaaaaaaagccgaatatctttactctgaa
attctttctttatgtgaacaaagaataaaaaatgaagatttactcaatgatgctgaagca
ccacaacttgaaaagtatgatgaatttattccttacccacttttacgcaaagcttttgct
agcaatcatttagatatgtcggaactaaggcagcaagtcgctttgtggtaa

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