Kalymmatonema gypsitolerans: NIES4073_09900
Help
Entry
NIES4073_09900 CDS
T10147
Name
(GenBank) phytoene dehydrogenase-related protein
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
scys Kalymmatonema gypsitolerans
Pathway
scys00906
Carotenoid biosynthesis
scys01100
Metabolic pathways
scys01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
scys00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
NIES4073_09900
Enzymes [BR:
scys01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
NIES4073_09900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
HI0933_like
Pyr_redox_2
Thi4
FAD_binding_3
GIDA
GDI
GMC_oxred_N
Lycopene_cycl
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
BAZ20114
LinkDB
All DBs
Position
694782..696284
Genome browser
AA seq
500 aa
AA seq
DB search
MQDTDVIVIGSGIGGLVTATQLAAKGAKVLVLERYLIPGGSAGYFERQGYRFDVGASMIF
GFGQNGTTNLLTRALQAVNVSLDVIPDPVEIHYHLPNGLDLKVERVYEKFLQNLTGYFPN
QSQGIRRFYDECWKVFHCLNSMDLLSLEEPRYLMRVFFQHPLACLGLVKYLPQNAGDMAR
RYIQDPELLKFIDMECYCWSVVPADMTPMINAGMVFSDRHYGGVNYPKGGVGQIAQKLVE
GLVKAGGQIKYQARVTKIIIENRRSVGVQLANGQIYRAKRIVSNATRWDTFGKLLSQQQI
PIAEKRWQQRYHKSPSFLSLHMGVKAEVLPQGTECHHIVLEDWEKMTAPEGTLFVSIPTL
LDPDLAPSGYHIIHAFTPEWIDDWQGLSAREYQEKKQEAARRIVDRLEKIFPGLNAGLDY
LEVGTPRTHRRFLGREDGTYGPIPRHKLRGLLGMPFNRTAIPGLYCVGDSTFPGQGLNAV
AFSGFACAHRIAVDLGLEAV
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatactgatgtcatcgtcattggatctggtattggcggcttggtaacagcgact
cagttagcggcaaaaggtgctaaagtacttgtcttggaacgttatctgattccagggggt
agcgcgggttactttgaacgccaaggctatcgcttcgatgttggggcgtcgatgattttt
ggtttcggtcagaacggtaccaccaacttactcactcgtgctttgcaagccgtcaacgta
agtttagatgtgattcccgatccagtggagattcattatcatctgcccaatggcttagac
ctgaaagttgagcgagtatatgaaaaatttttgcaaaatctaactggctatttccccaat
caaagccaagggattcgtcgcttttatgacgagtgttggaaagtatttcattgtctcaac
agcatggacttgctgtcgcttgaagaaccccgatatttaatgcgtgtattttttcagcat
cctttagcgtgtcttggtttggtcaagtatctgcctcaaaatgccggagatatggcgcgg
cgctatattcaagaccccgagttgttgaaatttattgatatggagtgttattgctggtcg
gtggtaccagctgacatgacgccaatgattaatgctgggatggtattttccgacaggcac
tatggaggagtcaactatcctaaaggtggtgtgggacaaatagcccaaaaattggtagag
gggcttgtcaaagcaggtggtcagatcaagtatcaagctagggtaacaaaaattatcata
gaaaataggagatccgtaggtgtgcaactggctaatggtcaaatctaccgtgctaagcgc
atcgtttccaatgctacacgttgggatacctttgggaaattacttagtcaacaacaaatt
cctattgctgagaaaagatggcagcaacgatatcacaagtcgcccagttttctgagtttg
catatgggagtgaaggcagaagttttgccccaagggacggaatgccatcacattgtgcta
gaagattgggagaagatgacagccccagaagggactttatttgtgtctatcccgacgttg
cttgatccagatttagcgcctagcgggtaccatattattcacgccttcacacctgagtgg
attgatgattggcaaggactctctgcgcgggagtaccaggaaaagaagcaagaggcggct
aggcgaattgttgaccgcttggagaagattttccctggtttaaatgcagggttggattat
ctggaggtggggacaccacgaacccatcgccgctttttaggtcgtgaggatggtacttac
ggaccaattcctcgccacaaattgcgggggttgttggggatgccgtttaacagaacggca
attccagggctttattgtgtgggagatagtacatttccaggtcaggggttgaatgcagtg
gcgttttccgggtttgcttgcgcccatcgcattgcggtggatttggggttagaagcggtc
tga
DBGET
integrated database retrieval system
