Kalymmatonema gypsitolerans: NIES4073_13320
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Entry
NIES4073_13320 CDS
T10147
Name
(GenBank) WD-40 repeat-containing protein
Organism
scys Kalymmatonema gypsitolerans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_EML
nSTAND1
Beta-prop_WDR75_1st
RMC1_N
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Ge1_WD40
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
eIF2A
PD40
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_WDR75_2nd
Beta-prop_RIG_2nd
Beta-prop_SCAP
B-prop_COPA_B_2nd
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_DCAF4
TPR_12
Beta-prop_NUP159_NUP214
AAA_16
PROPPIN
Beta-prop_IFT140_2nd
WDR54
AAA_25
RsgA_GTPase
ATPase_2
AAA_23
AAA_29
TPR_19
Motif
Other DBs
NCBI-ProteinID:
BAZ20456
LinkDB
All DBs
Position
1071373..1077855
Genome browser
AA seq
2160 aa
AA seq
DB search
MTNIMNQQGQIEDIPAFNENSLQELNWAIESSGGEFSLILAHCNSASLRQRLTQKLQASC
RVEIREIILDQPVTTLYTTIQAELGNEHPEALIVSGLESVKAIDSMLTGANQVREEFRKN
FPFPVVLWVTDEVLQKLIRLAPDLQSWTTAVEFAIPTEDLIQCIQQTADEVFAKVLEVGA
GRFLDNTALNLGIGSPRRTELELARVELQNRGVTLHPEIESSLEFVLGRDARGSMEQSRQ
HYERSLAILEKAAQEDKQTAEGTSPHLPIAPQAHSVGTSSPPSPHSPLPTLLERRACLLY
CMGLWWRTYAVLHHTESDRARATAKDYFQECITVFDQANREDLVANFINGLGAVLQRMHC
WDELEAVARRAISLHQTYPHPFRLARAYGFLAEVALAKSAWKEAQESAQQALAILDNAAS
TAENSVSCETIADLEWEQSSHRGWYLFALARAQIALGEKTEAIATLETAKVQTKAQYEPE
LYIHILSELRDCYFKEAEYLKAFNIKLELRSNEQTYGIRAFTGAGRLQPKQQVTNPALAL
VEQQETVAQEIAATGREQDIKRLVERVARPDHKLTIIYGQSGVGKSSILQAGLIPVLKHK
AIGTRDVVPVLQQVYPDWIRELGDRLAEALPERRTSPPTPPLVGEGRQTPPFPAREGGLG
GLGLSDTKSFTSNLLPINGEGAGDGVSAILNQLETNADNELLTVLIFDQFEEFFFVYKDP
KQRLTFYNFLRECLDVPHVRVILSLREDYLYYLLECNDRLTNLEVINNNILDKDILYYLG
NFSREDTKALIESFTHTTKLLLEPELIDLLVEDLAGDFGEIRPIELQVVGTQLQTEKILT
LAQYQKHGPKEELVGKFLEEVVKDCGIENEQIAKLVLYLLTDENNTRPLKTRADLELELE
VKSETLDLVLLILVKSGLVFKVPAVPADRYQLVHDYLVPFVRQQQSERLIAELEKEREQR
KLTEAKLNEVLKQKLKTARRSAITLASLLVLICGVATLATTVGINTYLTSLTLDSEKKSE
LDRVVSALKVAKQFKQLSIAAIPETRLRVLRELNQAVYGVTERNRLEGHTESVTSVSFSR
DGKLLASGSEDKTVKLWDLDSRKDVKTFSKHTGSVTNVSFSPDGKIIASASKDKTVKLWS
LNGTLLKNLKHDDGVISVIFSPDGKMIATACEDKTVKLWSIDGTLLKNLKHDDSVITISF
APNSKMLATASNDDTIKIWNIDGIKIQTINNYGAIDIKFSSEGHIIATNKDHKVKYYDRD
GNLLKTSLFSRSPSLSNLISSTFHSDGNLLAVVEPSSNRDNRILILNTKQLYFNREFPGH
SDKINYLSFSPNGKLLASASKDKTVKLWNIDSKLSNLTEYGISEVRFNPDGKTVMTASND
NKVQFWKRDATFPKNFQKYGSQPSFSPDGKTIFTTSADKIVKRLLTLDGREIQLFNEHGD
SVSEISFSPDSKIIAAPNGDSTISLWRSDGNLIKTLKGHTDKVTDITFSPDSKIIASIGN
DNVVKLWKNNGTLIKTLGHTGHIKGVMFSSDSKILASIDNSNVAKIWRNNGTFLKTLEEP
IEGVENITFSPDSKMIITSSGDNEEVNLLNSDGTKITTLKGQIVKLWRSDGTLVKTLNGH
LDGVKNMTFSPDGKIIASTGDDNIVKLWHSNGTLIKTLQRHTDSVTSVIFSPNGRIIASL
SSNANNAFFSSNAENSMINLWRSNDGTLIKSIDNYGINSIKFSSDSTIIASINKDKTIKL
LSSNGTLRTVLKEHNDKITNLSFSKDSKLIASISQDNTMRLWNLDRKQKSIRRGYSSEKK
CYFIPEYCQVNLSSDGKIITAVTTSVRSEDNKSIYTLQMWTIDDKKPQTLKELSDVHFSK
DGKLIASVSEDIKSNYTVKFWNGEGKQVKSFSALKASSFSFSPDGRTVAVTTNKNYSVQL
WSTDEMLTTINGHSDQINSASLSPDGKTIASSSSDNTIKLWTREGVLLRTLKGHTDKVNS
VIFSPDGKTIASASDDTTVKLWNLEGKEIKTLKGHKDKVKRVIFSPNGKIIASASDDKTI
NLWKSSADSPFQTLEGVSNQKISFSSDSNILTVSSAEYGNVKLYFLNSIWFKDTEFSDSQ
YHDVGFSPDGKAIALASDNGVSVLSWDLDDLLVRGCNWARDYLKNNPKAKGDRTLCDDIK
NT seq
6483 nt
NT seq
+upstream
nt +downstream
nt
atgactaatattatgaatcagcaggggcaaatcgaagatattccagctttcaacgaaaat
tctctacaggagttaaattgggctattgaaagttctgggggagaattttcgctgattttg
gcacactgtaattctgccagtttgcgacagcgcttgacgcaaaaattgcaagcatcctgt
cgtgtggaaatccgcgagataattctcgatcagcctgttacaaccctctacacaacgatt
caagcagaactgggtaacgagcatcccgaagcgttaattgtttctggcttagagtcggtg
aaagcgattgattctatgctgacaggtgcaaaccaagtcagggaagagtttcgcaaaaat
ttccccttccccgtggtgttatgggtaacagatgaggtgctgcaaaagctaattcgccta
gcgcccgatctccaaagttggacaacagcagttgaatttgccatccctactgaagattta
attcaatgtatacagcaaacagctgatgaagtttttgccaaagttttagaagtgggtgcg
gggagatttctcgataacaccgctcttaatctggggattggttcgccaaggcgcacggag
ttggagttagcgcgagtggaactgcaaaatcgcggtgtaacgttacatccagaaattgaa
tcgagtttagagtttgtcttaggtagagatgctcgtggttcaatggagcagtcccggcaa
cattacgagcgtagtttagcaattttggagaaagcagcgcaggaggacaagcagacagcg
gaaggaacatctccccatctccccattgccccccaagcccactccgtggggacctctagc
cccccatctccccactcccctcttccaacattgcttgaacgccgcgcttgtctcctctac
tgcatgggtttatggtggcgtacttacgctgtgttgcatcatacggaaagcgatcgcgct
cgtgctacggctaaagattattttcaggaatgtataaccgtatttgaccaagctaaccgt
gaggatttggtagctaattttatcaatgggttgggagcagtactgcaacggatgcactgc
tgggatgagttagaagccgttgctcgtagagcaatatctctgcatcaaacttatccgcat
ccatttagattagcaagagcttatggctttttggctgaggtagcacttgctaaatcggct
tggaaagaagctcaagaatcagcacagcaagccttggcgattttggataatgcagcatcc
accgcagaaaattctgtctcatgtgagacaattgccgatttagaatgggagcaatcatct
caccgaggctggtatttatttgctttggcaagggcgcaaattgcacttggcgagaaaaca
gaagccatagctaccttagaaactgctaaggtacaaactaaggcacagtatgagccagag
ctttacattcacattttgagcgagttacgcgactgttactttaaagaagctgaatatctc
aaagcattcaatattaaattagaactgcgatccaacgagcaaacgtatggtatccgtgct
tttactggtgcaggacgattgcagccaaagcaacaggtgacaaaccccgctttagcactg
gtagaacagcaagagacagtcgctcaagaaattgctgcgacaggaagagagcaagatatc
aagcgcctggttgagcgcgtagcccgtcctgatcacaaactgacgattatttatggacag
tcgggtgtgggcaaaagttcgattttgcaagctggcttgataccagtattaaaacataaa
gcgatcggcacgcgtgatgttgtcccagttttgcagcaagtttatcctgattggattcgg
gaactgggcgatcgtttagctgaggcgcttccagaaaggcgaacctctcccccaacccct
ccccttgtaggggaggggagacaaactccccccttccctgctagggaaggggggctaggg
gggttaggtctaagtgataccaaaagttttacatctaacctcctccccatcaacggggag
ggagcaggggatggggtcagcgctatcctcaaccaattggaaacaaatgctgacaacgaa
ctcctgacagttttaatcttcgaccaatttgaagagtttttctttgtttacaaagaccca
aaacaaaggctcactttttataactttttgcgggaatgcttggatgttccccatgtaaga
gtcatcctgtccttacgggaagattacttatattatctattggaatgtaacgaccgcctt
accaatttggaagtcattaacaataatatccttgataaagatattctttattacttgggt
aatttttcacgagaagacaccaaagcattaattgaaagctttactcacacaaccaaatta
ttattagagccagaactcattgacttattggtagaagatttagcaggtgattttggcgaa
atccgcccaattgagttgcaagttgtggggacgcaactgcaaacagagaaaattctaacc
ctggcacaatatcaaaaacacggtccaaaagaagaacttgtaggaaaatttttagaagaa
gttgttaaagattgcggcatagaaaacgagcaaatcgccaaattagtgttgtacttgctg
acagatgaaaacaacactcgccctctaaaaactcgtgctgatttggaattggaattagag
gtaaaatctgaaactctcgatttagttttattaattctagtgaaatcggggttagtgttt
aaagtgccagcagttcctgctgaccgctatcagttggtacatgattatttagttccgttt
gttcgtcagcaacaatcagagcgattgattgcagaattagagaaggagagagagcaacgc
aagctgactgaagcgaagctgaatgaagtgctgaaacaaaaactgaaaactgcacgtcgt
tcagcaattactctagcatcactattagttctaatatgtggagtagctaccctagcaact
acagttggaataaatacatacctcacatctctaactttagactcagaaaagaagagtgaa
cttgatcgggtggtatctgctctcaaagtagcgaagcaatttaaacaattatcaatcgca
gcaatacctgagactcgacttagggttttgagagagctgaatcaagcagtctacggagta
acagaacgcaatcgtctggaaggacatacagagagcgtaacgagcgtcagttttagccgt
gacggtaaactgctagcttcgggtagtgaagataaaactgtgaaactttgggatcttgac
agtagaaaagatgtaaaaactttttcaaaacatacaggtagcgtcacaaacgttagtttt
agtcctgatggtaagataatcgcttcagctagtaaggataaaactgtaaaactttggagt
cttaacggaactctcctcaaaaacttaaagcatgacgatggtgttatcagtgtcattttt
agccctgatggcaagatgattgctacagcttgtgaagataaaactgtaaaactttggagt
attgacggaactctcctcaaaaacttaaagcatgatgatagtgttatcactataagtttc
gctcctaacagcaagatgctagctacggctagtaatgatgacactataaaaatttggaat
attgatggaataaaaattcaaacaatcaataactatggtgcaattgacattaaattcagt
tcggagggacatattattgcgactaataaagatcacaaagtcaaatattacgatagagat
ggtaacttactcaaaacaagtctgttttcccgttcaccttctctctctaatttgattagc
tcaacttttcattctgatggtaatctgctagcagttgttgaaccatctagcaacagagat
aatcgcattcttatcttaaatactaaacaactctatttcaacagagaatttcctggacat
agcgacaaaatcaattatctgagttttagtcctaatggcaagttattagcctcagcaagc
aaggacaaaacagtgaaattgtggaatattgacagcaagctttctaacttgactgagtat
ggtataagtgaggtgcgttttaatcctgatggcaaaactgtgatgacggctagtaatgat
aacaaagtgcaattctggaagcgtgatgccacttttcccaaaaattttcagaaatatggt
tcacaaccaagtttcagtcctgatggaaaaactatttttaccaccagtgctgacaagatt
gtcaaacgcctgttgactcttgatggtagagaaatccaactttttaatgagcatggcgat
agtgtcagtgagatcagtttcagtcctgacagtaaaatcatagctgctcctaatggagat
agtacaatcagtctttggcggagtgatggtaatctcatcaaaactttaaaaggacatact
gacaaagttacagatatcacttttagcccggatagcaagattattgcctcgattggcaat
gacaatgtagttaaactctggaagaataacggcactctcattaaaaccttaggtcatact
gggcacatcaagggtgtaatgtttagttcggatagtaagattcttgcttctattgataat
agcaatgtagcaaaaatttggagaaacaatggcacttttctcaaaactttagaagagccg
attgagggagtagagaacattactttcagtcctgatagcaagatgattattacctctagt
ggtgataacgaagaagtgaatctcttgaacagtgatggcactaaaattacaaccttgaaa
gggcagatagtaaaactttggcgaagtgatggcactttagttaaaaccctaaatggacat
cttgatggggtcaagaatatgacattcagccctgatggtaagattattgcctctactggt
gatgacaacatcgtaaaactttggcacagtaatggcactttaatcaaaactttacaaaga
catactgatagtgttaccagtgttattttcagtcccaatggcagaatcattgcttctctt
agtagcaatgctaataacgctttttttagtagcaatgctgaaaacagcatgataaacctt
tggcggagtaacgacggcaccttaattaaatctattgataactatggtattaatagtatt
aaatttagctcggatagtactattattgcttcaatcaataaagataaaactattaaactt
ttgagtagtaatggcaccttgcgtaccgtactgaaagagcacaatgataaaattacaaat
ctaagttttagcaaggacagcaaattaattgcctctatcagtcaagacaatacaatgaga
ttatggaacctagaccgcaagcaaaaatcaattcgtagaggatatagtagtgaaaaaaaa
tgctattttattcctgaatattgtcaggttaatttgagtagcgacggtaaaataatcact
gctgttactacctctgttcgttctgaggataataagtctatctatacactacaaatgtgg
actatagacgacaaaaaaccccaaactctcaaggagctaagcgacgtacactttagcaaa
gatggcaaacttatcgcttctgtcagcgaagatattaagtctaactacacagttaagttc
tggaacggagaagggaagcaagtaaagtctttctcagctttaaaagccagtagcttcagc
ttcagtcctgatggcagaacagttgctgtgactactaataaaaattattctgtgcaactt
tggagtacggatgagatgctaacaacaattaatggacatagtgaccagataaacagcgcc
agtctcagccctgatggtaagactattgcctctagtagttctgacaatactattaagctt
tggactagggaaggtgttctcctaagaaccttaaagggtcatactgataaggtcaacagc
gtaatttttagccctgatggtaagactattgcttctgctagtgatgacacaactgttaag
ctgtggaatcttgagggcaaggaaataaaaacccttaaaggacacaaagataaagttaaa
cgtgtgattttcagccctaatgggaaaatcattgcttctgctagtgatgacaagactatt
aacctctggaaaagtagtgcagatagtccgtttcaaaccctagagggagttagtaatcaa
aaaatcagtttcagttcggatagcaatatactgactgtatctagtgctgagtacggaaat
gttaaactctattttctcaatagtatttggttcaaagatactgaattttctgatagtcag
tatcatgatgttggtttcagccctgacggcaaggcgatcgctctagcaagcgataatgga
gtatcagttttgagttgggatttagatgatttactggtacgcggttgcaattgggcgcgt
gattatctcaagaataatcccaaggcaaagggcgatcgcactctttgcgacgatatcaag
taa
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