Kalymmatonema gypsitolerans: NIES4073_17750
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Entry
NIES4073_17750 CDS
T10147
Name
(GenBank) FliA/WhiG subfamily RNA polymerase sigma 28 subunit
KO
K03090
RNA polymerase sigma-B factor
Organism
scys Kalymmatonema gypsitolerans
Brite
KEGG Orthology (KO) [BR:
scys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scys03021
]
NIES4073_17750
Transcription machinery [BR:
scys03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NIES4073_17750
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
DGKD_4H
PhyR_sigma-like
Motif
Other DBs
NCBI-ProteinID:
BAZ20897
LinkDB
All DBs
Position
1636919..1637638
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AA seq
239 aa
AA seq
DB search
MVTEKSRTRVSPAIELQRRNQIAQTHSKLVHKIVHRWVNKCNESYEDLYQIGFLGLLKAV
ERFESELGHAFSSFAVPYIQGEIQHYLRDNASQLKIPRSSIEKLSKIRRLRKQFIALGRQ
VNEVDVAAKLGISAQEWESLKLTVSRRLTVSWDELPYEPLIEDSEAITQEESTQLLYEAI
SKLHPKHRLVIRERYLLNKEVVEVAKVLKISTAETQALIQEAIFILNSSLSALYGSSFG
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggtcacagaaaaaagcaggactagagttagtcccgcaattgaacttcaaagacgtaat
cagattgcccaaacccacagcaaattagttcataaaattgtgcatcgttgggtaaataaa
tgtaacgaaagctacgaagacttatatcaaatagggtttcttggacttctgaaagccgtt
gagcgctttgagtcagaacttggacatgcttttagttcttttgccgttccttatatccaa
ggtgaaattcagcactacttgcgggataatgcatcacagttaaaaattcctcgttcttca
atagaaaagctaagtaagatcaggcgcttaagaaagcaatttatcgctttaggaagacag
gttaatgaagtcgatgtagctgctaaactcggaatcagcgctcaagagtgggaatcccta
aaactcaccgtttcgcggcgcttaactgtaagctgggatgagttaccttatgaacctctg
attgaagattcggaagcaatcacccaagaggaatcaactcagctgctttatgaggcgatc
tcaaaacttcatcccaagcataggcttgtgattcgagagcgctatcttctgaataaagaa
gttgttgaagtcgctaaagtgttaaaaatttcaaccgcagaaactcaagcattaatacag
gaagcaatttttattttgaactcatcattaagtgcgctttatggaagttcatttggttga
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