Scytonema sp. NIES-4073: NIES4073_20380
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Entry
NIES4073_20380 CDS
T10147
Symbol
hisS
Name
(GenBank) histidyl-tRNA synthetase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
scys Scytonema sp. NIES-4073
Pathway
scys00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scys00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NIES4073_20380 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scys01007
]
NIES4073_20380 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scys03016
]
NIES4073_20380 (hisS)
Enzymes [BR:
scys01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
NIES4073_20380 (hisS)
Amino acid related enzymes [BR:
scys01007
]
Aminoacyl-tRNA synthetase
Class II (A)
NIES4073_20380 (hisS)
Transfer RNA biogenesis [BR:
scys03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
NIES4073_20380 (hisS)
Prokaryotic type
NIES4073_20380 (hisS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
tRNA-synt_2b
Rota_NS35_N
Ada3
Motif
Other DBs
NCBI-ProteinID:
BAZ21160
LinkDB
All DBs
Position
complement(1965069..1966457)
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AA seq
462 aa
AA seq
DB search
MAKSDKINFSTPSGFPEFLPGEKRLELYLLDTIRRVFESYGFTPIETPAVERLEVLQAKG
NQGDNIIYGLNPILPPNRQAEKDKAGETGSEARALKFDQTVPLAAYIARHLNDLTFPFAR
YQMDVVFRGERAKDGRYRQFRQCDIDVVARRELSLLYDAQMPAIITEIFDAVNIGDFLIR
INNRKILTGFFKSLGIEETKIKSCIGIIDTLEKVGEKKVKQELEQEGILAEITQKIIDFV
HINGTVDEVLDKLKYLAQTTPEAEEFSLGVTELETVISGVRNLGVPENRFCIDLSIARGL
NYYTGTVYETTLIGHEALGSICSGGRYEELVGIFLDEKMPGVGISIGLTRLISRLLKAGI
LNTLAATPAQVMVVNMQDDLMPVYLNVSQKLRKAGINVITNFEQRPLGKQFQLAEKQGIP
FCVIIGSEEAAAQKASFKDLRTREQVEVTLEDLAEEIKRRLA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaagtgacaaaataaatttctctacccccagtggttttccagaatttcttcct
ggcgaaaagcgtctggaactatatttacttgatacaatccggagagtttttgaaagctat
ggatttacacctatagaaactcccgcagtagaacggttagaagttctgcaagcaaaaggc
aatcaaggcgacaacattatctatggtcttaatcccattctgccaccaaatcggcaagca
gagaaagataaggcaggcgaaacaggttcagaagcaagagctttaaaatttgaccaaaca
gttcctctggctgcgtatattgctcgtcacctcaatgatttgacctttccctttgctcgg
taccaaatggatgtggtgtttcgtggagaaagggcaaaagatggtcgatatcgtcagttc
cgtcagtgcgatattgatgttgtggcccgtcgcgaactgagtttgctctacgacgctcag
atgcctgctattatcactgagatatttgacgcagttaatatcggtgattttctgattcgt
atcaataatcgtaaaattcttactgggttctttaagtccctagggattgaagaaaccaaa
attaaatcttgtattggcattattgatacactggaaaaagtcggtgagaaaaaggtaaaa
caagagttagaacaagaaggtattttagcagagataactcaaaaaattatcgattttgtt
catattaatggcacagttgatgaggtactagataagctcaagtacttagctcaaacaaca
ccagaagctgaggaatttagtctgggagtgacagagttagaaacagttatttctggagtt
cgcaatcttggggttccggaaaatcgtttctgtattgatttgtccattgctcgcggtctt
aattattatacgggtacagtgtatgaaacaacccttataggacatgaagctttgggcagc
atttgctctggcggtcggtatgaagaattagtcgggatatttttggatgaaaaaatgccc
ggagtgggtatttctattggcttaactcgcttaattagtcgattgctgaaagctggtatt
ctgaatacgttagctgccacaccagcgcaagtaatggtggtgaatatgcaagatgatttg
atgcctgtttatttgaatgtgtcgcaaaagctacgtaaggcaggaattaatgttatcacg
aattttgaacagcgacctttgggcaaacaatttcaactggctgaaaaacagggaattcca
ttttgtgtgattattggttctgaggaagcagcagcgcaaaaggcttctttcaaagatttg
agaacacgcgaacaggtggaggtaacactggaagatttggcggaggaaattaaacgaagg
cttgcgtaa
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