Kalymmatonema gypsitolerans: NIES4073_20980
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Entry
NIES4073_20980 CDS
T10147
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
scys Kalymmatonema gypsitolerans
Pathway
scys00550
Peptidoglycan biosynthesis
scys01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scys00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NIES4073_20980
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
scys01002
]
NIES4073_20980
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scys01011
]
NIES4073_20980
Enzymes [BR:
scys01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NIES4073_20980
Peptidases and inhibitors [BR:
scys01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
NIES4073_20980
Peptidoglycan biosynthesis and degradation proteins [BR:
scys01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
NIES4073_20980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Transpeptidase
Peptidase_S11
Motif
Other DBs
NCBI-ProteinID:
BAZ21220
LinkDB
All DBs
Position
complement(2046666..2048138)
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AA seq
490 aa
AA seq
DB search
MPKRISLGFLLLFLGTQVGITALKPVQAQTPAVPTETTTKSICPAQLEASVDAVINRPQF
TRARWGILVQPLSSTQTLYSRDAQKYFTPASTTKLLTTAAALQQLGTNFRIRTSVYRGSN
GVLYVVGRGDPSLTDAQLAALAKQLKQRGIQRVNQLIADDTYIKGDIVHPSWQWEDIQSD
YGAPINSLILNQNVFNVRLLPQTVGQPLKVIWTDISEDRQWQVINQSVTTAENQPTFTNV
TRDLKGQTLRIQGQLAVNSEPALVSLPVLAPAEYFLRRFRSTLIAEKIPVLQMFVSPTSV
KNEEELANVESPPLSELLALTNINSNNLFAESLLRALAIKKPPLENQTSADAGLEVMKAT
LTQMGVDPVGYSVVDGSGLSRKNLISPEALVQTLQAMAKSPAALVYRASLPVAGRSGTLK
NRFQNTPAEGIVQAKTGTMSGVVSLAGYVNAPRYGPVVFSIMVNQSEQPARVVRQGMDEI
VVLLAQLQNC
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaagaatctctcttgggttcctgctgctatttttgggcacccaggtaggtatt
accgccctaaaaccagttcaagcacaaacaccagctgtaccaacagaaaccaccacaaaa
tcaatttgtcccgcccaactggaagcatctgtagatgctgtgatcaatcgtcctcaattc
actcgggcgcgttgggggattttagtacaacctttgtcttctactcaaactctttacagt
cgggatgcccaaaaatactttaccccagcttccacaactaaactgctgacaacagctgct
gcactacagcaacttggtacaaattttcgcattcgcacctctgtatatcgcggtagtaat
ggtgttttgtatgttgtgggtaggggagatcccagtttgacagatgcacaattggcagct
ttagcaaagcagttgaaacagaggggtattcagagagtcaatcagttgattgctgatgat
acttatattaaaggagatattgttcacccctcttggcaatgggaggatatacagtcagac
tacggcgcacctatcaacagcctcattttaaatcaaaatgtttttaatgtaagacttctg
ccgcaaactgtgggccaacctctcaaagttatctggactgatatcagtgaggatagacag
tggcaagttattaatcagtcggtaacaacagcagaaaaccaaccaacattcactaatgtt
acccgtgatttgaaaggacaaactttacgaattcaagggcaattggcagtaaattctgaa
cctgcgttggttagtttacctgttcttgctcctgctgaatatttcttacgtcgttttcgt
agtactttgattgcagaaaaaatccctgttctacagatgtttgtgtcacctactagtgtc
aagaatgaagaagaattagctaatgtggaatctccgccactatccgaactgctcgcactg
acaaacatcaatagtaataatctctttgctgagtcattgttgagggcattagctattaaa
aaaccaccccttgaaaatcaaacttctgctgatgcaggtttggaagtgatgaaggcgacg
ttaacccagatgggagtcgatccagttggttactctgtggtagatggttcaggcttatct
cgtaaaaacttaatcagtccagaagctttggtacaaactttgcaagcaatggcgaaatca
ccagcagcgttggtgtatcgtgcatctttacctgtcgcaggtagaagcggaactctgaaa
aatcgctttcaaaacacacctgctgaaggtattgtacaagcaaaaacaggcacgatgagc
ggtgttgtttccttggctggatatgtgaatgcgcccagatatggtccagtcgtttttagt
attatggtgaatcaaagcgaacagcctgcaagggttgtgcggcagggaatggatgaaatt
gtggtgttattagctcaactacaaaattgttaa
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