Scytonema sp. NIES-4073: NIES4073_28580
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Entry
NIES4073_28580 CDS
T10147
Name
(GenBank) polyprenyl synthetase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
scys Scytonema sp. NIES-4073
Pathway
scys00900
Terpenoid backbone biosynthesis
scys01100
Metabolic pathways
scys01110
Biosynthesis of secondary metabolites
Module
scys_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
scys00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
NIES4073_28580
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
scys01006
]
NIES4073_28580
Enzymes [BR:
scys01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
NIES4073_28580
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
NIES4073_28580
2.5.1.29 geranylgeranyl diphosphate synthase
NIES4073_28580
Prenyltransferases [BR:
scys01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
NIES4073_28580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
BAZ21977
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All DBs
Position
2906974..2907942
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AA seq
322 aa
AA seq
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MNTQVFERSLQNSQLVQPQGFEREIKQATFDLKAYLSQRQAQVEAALEESITVVYPEKIY
EAMRYSLLAGGKRLRPILCLASCELSGGTQQMAMPTACALEMIHTMSLIHDDLPAMDNDD
YRRGKLTNHKVYGEDIAILAGDALLAYAFEFIAVHSKGVPAQQLLQVVAKLAHAVAATGI
VGGQVLDLEHEGQQNVDVKTLNFIHTHKTGALLEASVVCGALLAGASEDILQRLERYARN
IGLAFQIIDDVLDITATTEELGKTAGKDQKAQKVTYPSLWGIEESRLEAKKLVEKAKAEL
ACFEKSAQPLIALADFITARTN
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaatactcaagtttttgaacggtcattgcaaaattctcaacttgtccagcctcaggga
tttgagcgtgaaatcaaacaagcaacttttgacctaaaggcttacttatcacaacggcaa
gcccaagtagaagcagcgcttgaggaatcaatcactgtagtctatcccgaaaaaatctac
gaggctatgcgctattctctgctggctgggggaaaacgcctgcgcccaattctgtgtctt
gctagctgtgaactctctggaggcacacaacagatggcgatgcccactgcctgtgcgctg
gaaatgattcataccatgtctctgatccatgacgacctgcctgccatggataacgatgac
tatcgacgaggtaaactgaccaaccataaagtttatggcgaagacattgccattctggct
ggtgatgcactgttagcctacgcctttgagtttattgcagtgcattccaaaggagttccc
gcccagcagttgttgcaagtcgttgctaagttggctcatgcagttgctgcaactggtata
gtcggtggtcaagttctggatttggaacatgagggacagcaaaatgttgatgtaaaaacc
ctcaactttattcacacccataaaactggagctttgttagaagcctcagttgtgtgtgga
gcactcctagctggagcgtcggaggatattttgcaacgactagagcgttatgctcgcaat
attggtctggccttccagattattgatgatgtgcttgatattaccgcaacaactgaggaa
ttagggaaaaccgcaggtaaagaccaaaaggcgcagaaggtcacttatcccagtttgtgg
ggtattgaggaatccagactagaggcgaaaaaattagttgaaaaagctaaggctgaacta
gcttgctttgaaaagagcgcgcaacctctgatagctctggcagacttcatcacagctaga
actaactaa
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