Scytonema sp. NIES-4073: NIES4073_32680
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Entry
NIES4073_32680 CDS
T10147
Symbol
pecF
Name
(GenBank) bilin biosynthesis protein PecF
KO
K02632
phycoerythrocyanin alpha-cysteine-84 phycoviolobilin lyase/isomerase subunit PecF [EC:
4.4.1.31
]
Organism
scys Scytonema sp. NIES-4073
Pathway
scys00196
Photosynthesis - antenna proteins
scys01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scys00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
NIES4073_32680 (pecF)
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
scys00194
]
NIES4073_32680 (pecF)
Enzymes [BR:
scys01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.31 phycoerythrocyanin alpha-cysteine-84 phycoviolobilin lyase/isomerase
NIES4073_32680 (pecF)
Photosynthesis proteins [BR:
scys00194
]
Antenna proteins
Phycobilisome - Cyanobacteria, Red alga [OT]
Phycoerythrocyanin (PEC)
NIES4073_32680 (pecF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
HEAT_PBS
HEAT
HEAT_EZ
Arm
TOR1L1_N
Motif
Other DBs
NCBI-ProteinID:
BAZ22386
LinkDB
All DBs
Position
complement(3401866..3402411)
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AA seq
181 aa
AA seq
DB search
MTAIFHSETIEAGAIATLIQALSHHHPSVRNTATEALVKLAPATVEPLIAAFRTSSDQGL
QAHIIHALAQIAVPTTLDLLSEVVGTAVANHCQGNVRRIAARGLGRIGSTTDNPEIMRHA
VEKLSWALLTPEDWGLRYAAAVSLQEIATPEACAFLQVAQNQESDKVVRSRITVALEQLT
S
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaatatttcatagtgaaacaattgaagcaggagcgatcgctacacttattcaa
gccttgagtcatcatcatccatctgtgagaaatacggcaactgaagctttagtcaagcta
gcaccagctactgtagaaccactcattgcagccttccgcacttctagcgaccaaggttta
caagctcacatcattcacgctttagcccaaattgctgtacccacaactttagatttgtta
tctgaagttgtaggtacagcagtagcaaatcactgccaaggcaatgttcgtcgcattgca
gcacgcggactgggacggataggtagtactactgacaacccagaaataatgcgccatgct
gtagaaaaactgagttgggctttgctcactcctgaagattggggattgcgttatgcagct
gcggtttctctacaagaaattgccacacccgaagcttgtgcttttttacaggtggcacaa
aatcaagagtcagataaagttgtgcgatctcggattacagtcgccctagagcagctgaca
tcttga
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