Kalymmatonema gypsitolerans: NIES4073_35670
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Entry
NIES4073_35670 CDS
T10147
Name
(GenBank) WD-40 repeat-containing protein
Organism
scys Kalymmatonema gypsitolerans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
nSTAND1
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WDR55
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_EIPR1
WDR90_beta-prop_4th
NBCH_WD40
RMC1_N
Beta-prop_RIG_2nd
Ge1_WD40
Beta-prop_Nup120_160
Beta-prop_SCAP
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_RIG_1st
WD40_like
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
Cytochrom_D1
Beta-prop_NWD2_C
Beta-prop_IFT80_2nd
PROPPIN
AAA_16
CHAT
AAA_22
ABC_tran
NACHT
Motif
Other DBs
NCBI-ProteinID:
BAZ22680
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Position
3748721..3752539
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AA seq
1272 aa
AA seq
DB search
MHVKTILILAANPTNTSRLRLDEEVREIDEGLRRANKREQFNLEQKWAVRSRDFYRAILD
YQPQIVHLCGHGAGKDGIVLEDETGQAALIRADALASMFKLFVTKGVDCVLLNACYSEVQ
ASAISQHVNYVIGMNQTVGDKAAVAFAVAFYDAMAAGEGVEFAYELGCSQMVTFVEQETP
VLRKKELITVTTQPETEVIPPNPYQGLSAFGEEDAAFFFGRETFVNGLVQAVHKQPLIAV
IGPSGSGKSSVVLAGLISQLREEGSWLIESFRPGNQPFYQLASALVSQLEPKMGDTQQLR
EAGGLAADMQQGKVTLQQVVSRIIERNPDKRLLLFADQFEELYTLCQVKEEQERFANTLL
EAIHQKSLTLVFTLRADFYGYVLSYRPLRDALHEFTPQLLSSMNQEELQAAIQQPAQKLE
VQLEDGLTQRILDDVGQEPGNLPLLEFALTRLWEKQVHRVLTHQAYDEIGGVKKAIANHA
EQIYQQLSEAEQKQTQRIFLQLVRPGEGTEDTRRLATRAEVGQDNWGLVSYLAGYQARLV
VTGRHEQEDTVEVVHEALIREWGTLREWINANRQFWVWQERLKVALREWKNSNHDSGALL
RGVPLTVAEDWLHKRADEMTQEERDFIRVSTQQRDREKQQRDRRRQLTIIGLGSFSVVAL
SLAGVAGVGWWSAAINQINSLTNTSDALLNSNGREALKTSLKAVVQMQRTPSVEANTRTQ
VELGLMHTVHNVAAPNTLGGHANSVIDVSFSPDGKMLATASADNTVRLWDTSTGKQIKTL
KGHTSRVNGVSFSPNGKMLATASYDNTVKLWDTSTGKQIKTLTGHTHSVLGVNFSPNTKM
LATASHDNTVKLWDTSTGKQIKTLTGHTNSVIGVSFSPDSKMLATASNDNTVRLWDTSTG
KQIKTLTGHTNSVNGVSFSPNGKMLASGSADNTVKLWDTSTGKQIKTLTGHTDEVIGVSF
SPNGKMLASGSADNTVKLWDTSTGKQIKTFTGHTEWVWGVVSFSPDGKMLASGSADNTVK
LWDTSTGKQIKTLTGHTNSVWGVSFSPDGKMLATASGDKTVKLWDTSTGKQIKTLSGHTN
WVYGVSFSPNGKMLATASSDKTVKLWDTSTGKQIKTLTGHTNAVLGVSFSPDSKMLATAS
SDKTVKLWDTSTGKQIKTLTGHTNSVLGVSFSPNGKMLASASYDYTVKLWDTSTGKQIKT
LTGHTDSVNGVSFSPNGKMLATASRDYTVRLWRWDFDYLLREGCDFIREYFNTNPPEDES
DRHMCDGIPSAK
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtcaaaacaattttgattctggcagcgaatcctaccaatacctcaaggctacga
ctggatgaagaggtacgggaaattgatgagggattacgacgggcaaacaaacgagagcag
ttcaacctagagcagaaatgggcagttcgttcacgagacttttaccgagcaatcctcgat
tatcagccccagattgtacacttgtgcggacacggtgctggaaaggatggtattgtcctg
gaagatgagacaggacaggcagcattgatccgggcagatgcattggcgagtatgtttaag
ctgtttgtcaccaaaggagtcgattgtgtccttttaaacgcttgttactcagaagtgcaa
gcttcggcaattagccaacacgtcaactatgtgattggcatgaatcagacggttggggat
aaagcagccgttgcctttgctgtagcgttttacgatgcaatggctgctggggaaggtgtg
gagtttgcctatgagcttggctgctctcaaatggtaacttttgtggagcaggaaactccg
gtactgagaaaaaaagagttaatcactgtcaccacacagccagaaacggaagttattccc
cccaacccttaccaaggattgtctgcatttggggaggaagatgcagcgttcttttttgga
agagaaacctttgtgaatggcttagttcaagcggttcacaaacagcccttgatagcagtg
attggtcctagtgggagtggcaaatcttctgtagtgttagcggggctgatttcacagttg
cgggaagagggaagttggttgatagaatctttccgtcctgggaaccaaccgttttatcag
cttgcttctgcattagtgagtcaattagaaccgaaaatgggtgacactcaacaactgcgg
gaagccggtggactagcagcagatatgcaacaaggcaaagtcaccttgcagcaggtggtg
tctcgcattatagaacgcaacccggataaacgtctgttgctgtttgcagatcagtttgag
gaactctacactctttgtcaggtgaaggaagaacaggaacgctttgctaatacgttgctc
gaagctattcaccagaaaagtttaacactggttttcactttacgggctgacttttacggc
tatgtgctttcctaccgtccgcttcgggatgcattgcacgagtttacaccccaactgctg
agttccatgaatcaggaggaactacaagcggcaattcagcaaccggcacaaaagctggaa
gtacaactagaggatggactgactcaacgaattctcgatgatgtggggcaagaacctggt
aacttgccattgttggaatttgccctcacccgactgtgggagaagcaggttcaccgcgtg
ttaactcaccaagcctacgatgaaattggcggtgtcaaaaaagcgatcgccaatcatgct
gaacagatttatcaacaactcagtgaggcagaacagaagcaaacacagcgaatttttctg
caattagtgcgtccaggggaggggacagaggatactcggcggctagcaacccgtgcggaa
gttgggcaagataattggggattggtgagttatttagcaggatatcaagcacgtttggtt
gtgacgggacgccatgaacaggaagatacggtagaggtggtgcatgaagcgctgattcgg
gaatggggaaccctgcgcgagtggataaatgctaaccgtcagttttgggtttggcaggaa
cggctgaaggtagcattacgtgaatggaaaaatagcaaccatgactctggggcgttgttg
cgaggtgtgccactcactgtggcggaagattggctgcacaaacgcgcggatgaaatgacg
caggaggaacgagattttattagggttagtacacaacaacgggatagagagaagcagcag
cgcgatcgcagacggcagctgacaattatcggactaggtagcttctctgtggtagctcta
agtttggcaggggttgctggcgtgggctggtggagtgcggcaattaatcaaattaattct
cttactaatacttcagatgcgcttttaaactcaaatgggcgagaagccttaaaaacaagt
ttaaaggctgttgtacaaatgcaacgtacaccctcggtagaggcaaatacccggacgcag
gtggaactaggattaatgcatacagttcacaacgtcgcagcgccaaacaccttgggagga
cacgcaaactcggttattgacgtcagcttcagcccggatggcaagatgctggcaactgct
agtgctgacaacacggtaagactgtgggacaccagcaccggcaaacaaatcaaaaccctt
aaggggcatacaagccgggttaatggcgtcagcttcagccccaatggcaagatgctggca
actgctagttatgacaacacggtgaaactgtgggacaccagcaccggcaaacaaatcaaa
accctcactgggcatacacactcggttttgggcgtcaacttcagccccaataccaagatg
ctggcaactgcaagtcatgacaacacggtgaaactgtgggacaccagcaccggcaaacaa
atcaaaaccctcactgggcatacaaactcggttattggcgtcagcttcagcccagatagc
aagatgctggcaactgctagtaatgacaacacggtaagactgtgggacaccagcaccggc
aaacaaatcaaaaccctcactgggcatacaaactcggttaatggcgtcagcttcagcccc
aatggcaagatgctggcttctggtagtgctgacaacacggtgaaactgtgggacaccagc
accggcaaacaaatcaaaaccctcactgggcatacagacgaggttattggcgtcagcttc
agccccaatggcaagatgctggcttctggtagtgctgacaacacggtgaaactgtgggac
accagcaccggcaaacaaatcaaaaccttcactgggcatacagagtgggtttggggcgtc
gtcagcttcagcccggatggcaagatgctggcttctggcagtgctgacaacacggtgaaa
ctgtgggacaccagcaccggcaaacaaatcaaaaccctcactgggcatacaaactcggtt
tggggcgtcagcttcagcccggatggcaagatgctggcaacggccagtggtgacaagacg
gtgaaactgtgggacaccagcaccggcaaacaaatcaaaaccctgagtgggcatacaaac
tgggtttatggcgtcagcttcagccccaatggcaagatgctggcaactgctagtagtgat
aagacggtgaaactgtgggacaccagcactggcaaacaaatcaaaaccctcactgggcat
acaaacgcggttttgggcgtcagcttcagcccagatagcaagatgctggcaactgcaagt
agtgacaagacggtgaaactgtgggacaccagcactggcaaacaaatcaaaaccctcact
gggcatacaaactcggttttgggcgtcagcttcagccccaatggcaagatgctcgcttct
gctagttatgactacacggtgaaactgtgggacaccagcaccggcaaacaaatcaaaacc
ctgactgggcatacagactcggttaatggcgtcagctttagccccaatggcaagatgctg
gcaactgcaagtcgtgactacacggtgagactgtggcggtgggattttgattatttactc
agggaagggtgcgattttatccgcgagtatttcaataccaatccccctgaggatgagagt
gacaggcatatgtgcgacggcattcctagtgcaaaatga
DBGET
integrated database retrieval system