KEGG   Kalymmatonema gypsitolerans: NIES4073_47560
Entry
NIES4073_47560    CDS       T10147                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
scys  Kalymmatonema gypsitolerans
Brite
KEGG Orthology (KO) [BR:scys00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:scys03016]
    NIES4073_47560
Enzymes [BR:scys01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     NIES4073_47560
Transfer RNA biogenesis [BR:scys03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    NIES4073_47560
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNase_H_2 DUF2321 DNA_pol_B_2
Other DBs
NCBI-ProteinID: BAZ23866
LinkDB
Position
5181461..5182084
AA seq 207 aa
MEDFQVCDRDLSDDALSHYLQAEVIAVDTETMGLLPQRDRLCLVQLCNNEGKVTAIRIAK
GQNDAPNLKKLLEAGNVLKVFHFARFDIATLRYNLGIHVAPVFCTKIGSKLARTYTQRHG
LKDVVQELEQVELDKSAQSSDWGNAANLSEAQLSYAANDVRYLIGVQHKLAEMLKREERL
ELAQECFRCLPTIVSLDLLQFKDLFEH
NT seq 624 nt   +upstreamnt  +downstreamnt
atggaagattttcaggtttgcgatcgcgaccttagtgacgatgctttatctcattatcta
caagctgaggtcattgctgtagataccgaaacgatgggattactaccacagcgcgatcgc
ttgtgtctcgtccagctatgtaacaatgagggcaaagtcactgcaattcgtattgccaaa
ggtcaaaatgatgctccaaacttaaaaaaactcttagaagctggtaatgtcctcaaggtc
tttcactttgcgcgttttgacattgccacactgcgttacaatttgggcattcacgttgct
cctgttttctgtaccaaaattggcagtaagttagcccgtacctacacccaacgtcacgga
ctcaaagatgtggtgcaagaattggaacaagtggaactcgataaaagcgctcaaagttct
gactggggaaacgctgctaatttatccgaggcacaactcagttacgccgccaacgatgtg
cgctatctcattggtgtacagcataaactcgcagaaatgctgaaacgagaagaacgctta
gaacttgctcaagaatgctttcggtgtttaccaacgatagtttccttggatttgttgcaa
ttcaaggacttgtttgaacattaa

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