Scytonema sp. NIES-4073: NIES4073_50140
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Entry
NIES4073_50140 CDS
T10147
Name
(GenBank) ABC transporter-related protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
scys Scytonema sp. NIES-4073
Pathway
scys02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
scys00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIES4073_50140
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scys02000
]
NIES4073_50140
Enzymes [BR:
scys01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
NIES4073_50140
Transporters [BR:
scys02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NIES4073_50140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_22
AAA_29
ABC_ATPase
AAA_21
AAA_25
Zeta_toxin
AAA_16
RsgA_GTPase
type_II_gspD_N0
AAA_30
AAA_15
AAA_23
Motif
Other DBs
NCBI-ProteinID:
BAZ24122
LinkDB
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Position
5486608..5488467
Genome browser
AA seq
619 aa
AA seq
DB search
MQLKISKPVQNLLKNLVKTTKFWQNNYLILREFKHFPRITVMALMFSLLAAIFEGFNVSL
LLSLLQSLTGDANSQQQFHTGIQWVDTVFLGVGADASTRLYRVSLLILITTWMRSGLNYV
AQLYTEITQLTLIDRLRKQIFEKLQSVKISYFSNTKSGELINTLTTEIERLKQAFGDAAF
LFSRTINAVVYLLSMFLISWQLSVISLMLFTLLAVGLSTLNGRVREASFDVTKASNRFTS
IAVEFINGIRTVHAFSTEDFERQRYYNASLNLVSASKKIALVWMVVKPFAEALATTILVG
MIVLAYTGLVTNGALQVASLLTFFFVLFRFVPIIQDINGVATHISTMYGSSEVVKKLLDI
DEKQYFRNGHIEFPGLKRSIDFVSVDFGYDSENLVLSNITLMIERGRMTALVGASGAGKT
TLADLIPRFHDPTQGHVFIDGVDLRDIEIHSLRRKIAVVSQDTFIFNTSVRNNIAYGSQG
ATDEEVYAAARLANALEFVQEMPEGFDTQLGDRGVRLSGGQRQRIAIARALLRDPEILIL
DEATSALDTVSERLIQESIEKLSVGRTVVVIAHRLSTIVRADKVVVLEQGQIVEQGGYQE
LLELKGKLWKYHQMQHQLN
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgcagctaaaaatttccaaaccagtccaaaatctgcttaagaatttagtaaagactact
aagttctggcagaacaactacctgatactgcgagaatttaaacactttccgcgaattacc
gttatggcattgatgttttcattgctggcggcaatttttgagggatttaatgttagtctt
ttgctttctcttctgcaaagcttaactggtgatgccaacagccaacaacaatttcatacc
ggaattcagtgggttgatactgtgtttttgggagtgggagcagatgcgtccactcggctg
tatcgcgtctcgttattgattttaattaccacttggatgcgttcaggcttaaattatgta
gcacagctttacaccgaaataactcagcttactttaattgataggctgcgcaaacaaata
tttgaaaaactacaatctgtaaaaattagttattttagcaatactaaatctggcgaactg
ataaatactttaacaacggaaatagaaaggctgaaacaagcttttggggatgcagctttc
ttattttcaagaacaataaacgctgtagtttacctattgtcaatgttcttgatatcttgg
cagctatctgtcatttcattgatgcttttcactttgttagccgtggggttatctacatta
aatggtcgcgtgcgtgaggcgagttttgacgtaacgaaagccagcaatagatttacttca
atagcggtagaattcatcaatggaattcgtacagttcacgcattttccactgaagatttt
gaacgtcaacgttattataatgccagcttgaatctggtcagtgcttccaagaaaattgcc
ttggtatggatggttgtcaagccatttgccgaggcgttagcgaccacaatactcgtggga
atgattgttctggcatatacgggtttggtaactaacggagcactacaagtagcttctcta
ttaacgtttttcttcgttctctttcgtttcgtgccaattattcaagatattaatggtgtc
gcgacgcatatcagtacaatgtacggctcctcggaagttgttaaaaaacttttggatatt
gatgagaaacagtatttccgcaatgggcatatcgaatttcctggcttaaaacgttcaatc
gactttgtgtctgttgattttggctacgacagcgaaaatttagtacttagtaacatcacg
ctgatgattgaacgaggcagaatgacagcactggtgggtgcttcaggggctggtaaaaca
acattggcggatttgattccgcgatttcacgatccaacacaaggtcatgtttttattgat
ggcgttgatttgcgggatattgaaatccactcgctgcgccggaagattgccgtggtcagc
caagatacctttattttcaacacttctgtccgtaataatattgcctatggatcgcaagga
gcaacagatgaggaagtttacgcagcagctcgactcgcaaatgctttggaatttgtccaa
gaaatgcccgaaggtttcgatactcaacttggagatagaggtgtgagactttctggcggt
cagcgtcagcgaattgcaattgctcgggctttactgcgggatccggaaattctgattttg
gatgaagcaacaagtgctcttgatactgtgtcagaacgactcattcaagagtctatagaa
aagctttctgtaggacgaacggtggttgtgatcgcccaccgcctatcaacaatagtccga
gcagataaagttgtcgtactcgaacagggacagattgtagaacagggcgggtatcaagag
ttgcttgagctaaagggcaagctttggaaatatcaccagatgcagcatcagctcaattaa
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