Kalymmatonema gypsitolerans: NIES4073_52280
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Entry
NIES4073_52280 CDS
T10147
Name
(GenBank) DNA polymerase III gamma and tau subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
scys Kalymmatonema gypsitolerans
Pathway
scys03030
DNA replication
scys03430
Mismatch repair
scys03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scys00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NIES4073_52280
03430 Mismatch repair
NIES4073_52280
03440 Homologous recombination
NIES4073_52280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scys03032
]
NIES4073_52280
03400 DNA repair and recombination proteins [BR:
scys03400
]
NIES4073_52280
Enzymes [BR:
scys01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NIES4073_52280
DNA replication proteins [BR:
scys03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NIES4073_52280
DNA repair and recombination proteins [BR:
scys03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NIES4073_52280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DnaA_N-like_STI
AAA
DNAX_ATPase_lid
AAA_22
RuvB_N
AAA_30
AAA_16
AAA_19
TIP49
AAA_5
AAA_lid_RFC1
PIF1
AAA_14
AAA_18
RCF1-5-like_lid
AAA_28
Rad17
Herpes_Helicase
TsaE
DUF815
Motif
Other DBs
NCBI-ProteinID:
BAZ24333
LinkDB
All DBs
Position
5741532..5743529
Genome browser
AA seq
665 aa
AA seq
DB search
MSYEPLHHKYRPKNFAELVGQEAIATTLTNAIRAAKIAPAYLFTGPRGTGKTSSARILAK
SLNCVNHEKPTPQPCGICDVCQGITKGYSLDVIEIDAASNTGVDNIREIIERAQYAPIQC
RYKVYVIDECHMLSTAAFNALLKTLEEPPKHVVFVLATTDPQRVLPTIISRCQRFDFRRI
NLEAMAKHLSYIAYKENISITPESITLIAQIAQGGLRDAESLLDQLSLLSGEVTPDRVWD
LVGSVSERDLLFLLNAIASDNPEAVLDCTRKILDSGREPLIILQNFAGFYRDLLIAKTAS
RRNDLVACTPQTWQALIDFAQEFDISTILAGQQHLRTAEVQLKNTTQPRLWLEVTLLGLL
PSANIPVQQNGRGAVFTPRVSPPPIAPAVVQGEQTPVASRETPSVSAPENNLRTTEFVSK
TVEVEEIKNHQTHNSSQTPSSPSSPPKVEAVSSVSQTHEVSEVTQFDLTQVWQQVLANLQ
PISRRELLRQMCHLIEFDGAVARVAIKQAWYKKVQSDQPKIAAAFKETFKCDVKINLEFA
TASTSIPAKTSPAQNKPVTPASYEPPRPPSPEVPKSRETPPTTTSNPTNNGTVPTSDASN
RSATPSPPQPQTSTEHWEVDEVAAAAQRLAQFFDGEIIRFTDDTERPNLTNISEWEDDSE
AEDEF
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacgaacccctgcaccacaagtatcgcccaaagaattttgctgaactagtgggg
caagaggcgatcgctaccaccctgaccaatgctatccgtgctgccaaaatagcccctgca
tacctgttcactggtcctagaggtacgggcaaaacctccagcgcccgtattttggcaaaa
tcgcttaattgtgttaatcatgagaaacctacgcctcaaccctgcggcatatgtgatgta
tgtcagggaattaccaaaggctattctttagatgttattgaaattgatgccgcaagtaac
actggtgtcgataatattcgcgagattatagaaagagcgcaatatgccccgattcagtgt
cggtataaggtttatgttattgatgaatgccatatgctcagtaccgcagcattcaacgcg
ctactgaagacactcgaagaaccaccgaaacacgttgtctttgtactggcgacgactgac
ccgcaacgagtcttacctactattatttcccggtgtcaacgcttcgactttcgccgaata
aatttagaagcgatggcgaagcatttgagttatatcgcttacaaagaaaatattagtatt
actccggaatcgatcacgctgatagcgcaaattgctcaaggcggattacgcgatgcagaa
agtctccttgaccagttaagtttattgtcaggtgaagtcacaccagatagagtttgggat
ttggtcggttcggtaagcgaacgcgatttgctttttttgttgaatgcgatcgcctctgac
aaccccgaagctgttctagactgcactcggaaaattctggattccggtcgcgaacctctg
attattctccagaatttcgctggattttaccgagatttactcatcgctaaaactgcgtct
cgtcgcaacgatttggttgcttgtactcctcaaacttggcaagcgctgatagattttgcc
caagagtttgacataagtacaattttggcaggacagcaacacctgcgaaccgctgaagtg
caactgaaaaacaccacacaacctcgtttgtggttagaggttacattgctgggattgtta
ccctcagcaaatatccctgttcagcaaaacggtagaggcgcagttttcacacccagagtt
tcaccgcctccaattgcaccagctgtagtccaaggtgaacaaacaccagttgcaagccgc
gagacaccttccgtatcagcaccagaaaacaacctgagaacaactgaattcgtttcaaaa
actgtagaagtagaagaaataaaaaaccaccaaacacataactcatcacaaactccctca
tctccctcatctccccctaaagtagaagccgtatcgtcagtatcccaaacacacgaagtt
agtgaggtaacacaatttgacttaacccaagtttggcagcaagtgcttgccaatctccag
ccgatttccaggcgagaattactgcgccaaatgtgccatcttatagaatttgatggtgct
gtagcccgtgttgccattaaacaagcatggtataaaaaagtccaatcagaccaacctaaa
attgccgcagcgtttaaggaaactttcaagtgtgacgtcaagataaacctggaattcgca
accgcatcaacttctatccctgcgaagacttctcctgctcaaaacaagcctgtcactcct
gcaagttacgaacctcctcgtccgccttctcctgaagttcctaaatcaagggaaacacct
ccgacaacaacttcaaatccgacgaataatggtacggtacctacttcagacgccagcaat
cgcagtgctacaccttccccacctcaacctcaaacttccacagaacattgggaagttgat
gaagtcgcagccgcagctcaacgtttggcacaattcttcgatggagaaatcatccgattt
acagatgacacagaacgaccaaacttaacaaacatctctgagtgggaagatgattcagag
gctgaagatgaattttaa
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