Kalymmatonema gypsitolerans: NIES4073_54540
Help
Entry
NIES4073_54540 CDS
T10147
Name
(GenBank) RNA polymerase sigma-37 factor
KO
K03090
RNA polymerase sigma-B factor
Organism
scys Kalymmatonema gypsitolerans
Brite
KEGG Orthology (KO) [BR:
scys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scys03021
]
NIES4073_54540
Transcription machinery [BR:
scys03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NIES4073_54540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_r4
HTH_7
HTH_23
Sigma70_ECF
HTH_Crp_2
HTH_24
LacI
Motif
Other DBs
NCBI-ProteinID:
BAZ24558
LinkDB
All DBs
Position
complement(5977242..5978015)
Genome browser
AA seq
257 aa
AA seq
DB search
MTASQFSIQFDGMELLRLYHQNPCIKIRNKLVQLHTGLVRKMAHKFSHQCNEPYEDLEQI
GYFGLIRAIERFDPRQGYAFSSFAIPYIRGEMLHFLRDRGTLLKIPRRWQELYNEGQRVR
KELAGTLGRPPKDSEIASVLKVSVQEWQETKLAVQNRMPLSLDATIVQNIDCQITLGEAL
PCQRSVAVQQQDEERQQLQGAINMLEEKPRMAVEMVYLKELSRKDTAKNIGTSPMTVTRY
LQKGVQDLVSMLTPQAV
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaagtcagttttctatccaatttgatggtatggaattattacggttataccat
caaaatccttgtattaaaattcgtaataaacttgtacaattacatactggcttagtacga
aagatggctcataaattcagtcatcaatgcaatgagccatatgaagatttagagcaaatt
ggttattttggtttgataagagcaattgagcgctttgatccaagacaaggatatgctttt
agttcgtttgccataccctacattcggggtgaaatgctgcactttttacgcgatcgcggt
accctattaaagattcctcgccgttggcaagaactctataatgaggggcaaagagttcgc
aaagaattggctgggactttaggtcgtcctcccaaagattcagaaattgcaagcgttctc
aaggtatctgtccaagaatggcaagaaaccaaattagctgttcaaaaccgtatgcctttg
agtttggacgctacgatagttcaaaacattgattgccaaattaccctaggtgaagcactt
ccttgtcaacgttctgttgctgtgcaacaacaagacgaagaacggcaacaacttcaagga
gcaataaatatgctagaagaaaagccccgcatggcagttgaaatggtgtatttgaaggaa
ctttctcgcaaagataccgctaagaatattggcacgagtccaatgacagttacacgatat
ttgcaaaagggagttcaagatttagtctctatgttaacaccgcaagcggtgtag
DBGET
integrated database retrieval system
