Kalymmatonema gypsitolerans: NIES4073_56350
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Entry
NIES4073_56350 CDS
T10147
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
scys Kalymmatonema gypsitolerans
Pathway
scys04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
scys00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
NIES4073_56350 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scys03016
]
NIES4073_56350 (trmU)
Enzymes [BR:
scys01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
NIES4073_56350 (trmU)
Transfer RNA biogenesis [BR:
scys03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
NIES4073_56350 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
NAD_synthase
QueC
Arginosuc_synth
Asn_synthase
DUF7411
Motif
Other DBs
NCBI-ProteinID:
BAZ24737
LinkDB
All DBs
Position
complement(6189718..6190773)
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AA seq
351 aa
AA seq
DB search
MKKVVVGLSGGVDSSTAAAILHDQGYEVIGLTLWLMKGKGQCCSEGMIDAAYICEQLGIP
HHIVDIRDVFQTHIVDYLVAGYSTGITPLPCSQCNKTVKFGPMLQYAREKLECDRIATGH
YARIQYDQAAGRYQLLRAVDRNKDQSYFLYDLSQDLLAGTVFPLGELQKTDTRRLATEHG
LKTADKPESQDLCLVESNGSMRAFLDKYLAPKKGDIVDPTGKVLGQHDGVHHYTIGQRKG
LGVAAAEPLYVIELDAVNNRVIVGDRTKATQPECTVGRVNWVSMPEPSTPIRTEVQIRYR
STPVPVTVIPLENSRVRVVFDEPQFSITPGQAAVWYDGDKVLGGGIIEQFS
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagtagtcgttggtctttctggtggcgttgacagttccaccgcagcagccatt
ttgcacgatcaaggttatgaagttattggtctgaccctttggctgatgaaagggaaaggt
caatgctgctctgaaggtatgattgacgcggcttatatctgcgaacaactgggcattccc
catcatattgttgatattcgcgatgtctttcagacccatatcgtcgattacctggtagct
ggttacagtactgggatcactcctttgccttgctcgcagtgcaataaaactgtgaaattt
ggtccgatgttgcagtatgctcgcgagaaattagaatgcgatcgcattgccaccggtcat
tatgcccgcattcagtatgaccaagcagctggacgttaccagttattacgagcagttgac
cgtaataaggatcagtcctactttctctatgatttgtcgcaagatttactagcaggcacc
gtatttcctctaggagaactgcaaaaaactgacactcgtcgtcttgccacagaacacggt
ttgaaaacagcagataagccagaaagccaagacttatgcttagtggaaagcaacgggtca
atgcgagcgtttcttgacaaatatcttgcgcccaaaaaaggcgatatcgttgatcccacg
ggcaaagttctcggtcaacacgatggtgtccatcattacacgatagggcaacgtaaaggg
ttgggggttgccgctgctgaaccgttgtatgtgattgaattggatgcggtgaacaataga
gtgattgtgggcgatcgcaccaaagcaactcaacccgaatgcactgtagggcgggtcaac
tgggtatctatgcccgaaccatcaaccccaattcgcactgaagttcaaattcgctaccgt
tcaactcctgtaccagtaacagtcattcccttggaaaactcccgtgtccgcgtagtattt
gatgaacctcagtttagcattacccccggacaagctgcagtttggtacgacggggacaaa
gtgttgggtggcgggatcattgaacaatttagctag
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