Kalymmatonema gypsitolerans: NIES4073_58010
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Entry
NIES4073_58010 CDS
T10147
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
scys Kalymmatonema gypsitolerans
Pathway
scys00061
Fatty acid biosynthesis
scys00071
Fatty acid degradation
scys01100
Metabolic pathways
scys01212
Fatty acid metabolism
scys02024
Quorum sensing
scys04146
Peroxisome
Module
scys_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
scys00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NIES4073_58010
00071 Fatty acid degradation
NIES4073_58010
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NIES4073_58010
09145 Cellular community - prokaryotes
02024 Quorum sensing
NIES4073_58010
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
scys01004
]
NIES4073_58010
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scys04147
]
NIES4073_58010
Enzymes [BR:
scys01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NIES4073_58010
Lipid biosynthesis proteins [BR:
scys01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NIES4073_58010
Exosome [BR:
scys04147
]
Exosomal proteins
Exosomal proteins of breast milk
NIES4073_58010
Exosomal proteins of breast cancer cells
NIES4073_58010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BAZ24901
LinkDB
All DBs
Position
6382127..6384121
Genome browser
AA seq
664 aa
AA seq
DB search
MSKTYDISAILSNLTERERQELQRLTDYSNLKSVPEIWALVAKRCGDTVALRDPHAKPEV
VITYTQLFQKIQQFAAGLQGLGVKAGERVSLISDNSPRWLIADQGIMTAGAVDAVRSSQA
EREELIFILANSGSRALVVEDLKTFNKLRSRLEDLPIQLVILLCDEAPPTDETLKIVNFT
QLMEIGANHTLEPVEQKPDTLATLMYTSGTTGKPKGAMLSHRNLMHQILALGAVVQPQVG
DMALSILPTWHVYERSCEYFLLSQGCTQIYTNLRSIKRDLKEFKPHYVVCVPRLLESIYE
GVQKQFREQPENKQRLINYFLGISEKYIKAQRIAQGLSLTNLNPSIFEQLAARMQATALF
PLHALGEQIVYAKVQEATGGRIKQMFSGGGALPKHIDDFFEIIGVEILQGYGLTETSPVT
HGRRYWRNLRGAVGQPIPGTETKIVDPETRKPLPTGERGLVLLRGPQIMQGYYQNPEATA
KAIDADGWFDSGDLGWVTPQNDLVLTGRAKDTIVLTNGENIEPQPIEDACLRSPYIDQIM
LVGQDQRSIGALIVPNLEALEKWAETQNLHLRLPDEAAKEQNKEDSANKTQVSVESKIIQ
DLFRQELNREVQNRPGYRPDDRIGPFKLILEPFSVENGLMTQTLKIRRHVVMERYRDIIN
GIFA
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaacatatgatatttccgccatattatctaatcttactgagcgagaacgccag
gaattacagcgtttaacagattactctaatctgaagtcggtgccagaaatttgggcgttg
gtagcaaagcgatgtggtgatactgtcgccctgcgcgatcctcatgctaaaccagaagtt
gtgattacatatacgcaactctttcaaaaaattcaacaatttgctgctggattgcaaggt
ttgggggtgaaagcaggagaacgcgtctccctgatttctgataacagtccccggtggttg
attgcagatcaaggtattatgactgctggggcagttgatgcagtgcgtagttcccaggca
gaacgggaagaacttatatttatcttggcaaatagtggtagcagggcgcttgttgtggaa
gatttgaaaactttcaacaagcttagatcacgtcttgaggatttaccaattcaattggtg
attttgctttgcgatgaagcacccccaacagacgaaactttgaaaatagttaatttcact
cagttgatggaaataggggcaaaccatactctagaaccagtagagcaaaagcccgacact
ctggcaaccctaatgtatacttctggcacgacgggcaaacccaaaggcgcgatgctttct
catcgcaacttgatgcaccaaattttagcgcttggggcagttgtgcaaccgcaagtggga
gacatggctctgagcatcctccccacatggcacgtctacgaacgtagttgtgagtatttc
ttactttctcaaggttgtacgcaaatttacaccaacttgcgctctatcaaacgggatttg
aaagaatttaaaccccattatgtggtatgtgtgccgcgcttattggaatcaatttatgag
ggagtgcaaaagcagttccgcgaacaacctgaaaataagcaacgtttgataaactacttt
ctgggcattagcgaaaagtatatcaaagcgcagcgaattgcccaaggattgagtttaaca
aatctcaacccctcaatatttgagcaattggcagctcgtatgcaagcaactgctttgttc
ccactccatgctttgggagaacaaatagtttatgccaaggtacaggaagcaacagggggg
agaatcaagcaaatgtttagcggtggtggtgcgcttcccaagcacatagatgactttttt
gaaattattggtgtggagattttgcagggctatggcttgacggaaacttctcctgtgact
catgggcgtcgttattggcgcaatttacgtggtgcagttgggcaaccaataccgggtaca
gaaacgaaaatagtagatcctgagactcgtaaacctttacccaccggggagcgaggtttg
gtgctgctgcggggaccacaaattatgcaaggctattaccaaaaccccgaagcaacagcg
aaagcaattgacgcggatggttggtttgatagcggggatttgggttgggtgacaccgcaa
aatgatttggtactaaccggacgggcaaaagatacgattgtattaaccaatggggaaaat
atcgagccgcagccaattgaagatgcgtgtttgcgatcgccctacatagatcagataatg
cttgttggacaagaccaacgcagtatcggtgcattgattgtccccaatttggaagccctg
gaaaaatgggccgaaactcagaatctgcatctacgtctaccagatgaagccgccaaagaa
caaaataaggaggactcagcaaacaaaacgcaagtcagcgtggagagtaaaataattcag
gatttatttcggcaagaattgaatcgggaagtgcaaaatcgtccaggctatcgaccggat
gaccgcattggtccgttcaagctgattctggagccgttttcagtagaaaatggcttgatg
acacaaaccttgaaaattaggcgacacgtggtgatggagcgctatcgcgatattattaac
ggcatatttgcctaa
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