KEGG   Kalymmatonema gypsitolerans: NIES4073_58370
Entry
NIES4073_58370    CDS       T10147                                 
Name
(GenBank) hypothetical protein
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
scys  Kalymmatonema gypsitolerans
Brite
KEGG Orthology (KO) [BR:scys00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:scys03016]
    NIES4073_58370
Enzymes [BR:scys01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     NIES4073_58370
Transfer RNA biogenesis [BR:scys03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    NIES4073_58370
 Prokaryotic type
   tRNA splicing ligases
    NIES4073_58370
SSDB
Motif
Pfam: RtcB
Other DBs
NCBI-ProteinID: BAZ24937
LinkDB
Position
complement(6416742..6417413)
AA seq 223 aa
MLHSGSRNIGNKLAQCHINTAKELAKMAGNKLPDPNLAHFVAGTPEFQAYWHDLQWAQNY
ARFNREVMMARFQRIVEKHLAGGKATKPLLEVNCHHNYAEKEVHFGEDVYVTRKGAVRAT
EEDYGIIPGSMGAKSYIVKGKGSANSFCSCSHGAGRLLSRAKAKNVYTLDDLIEQTKGVE
CRKDTGVLDEIPGAYKPIEEVMENQADLVEVVATLKQVVCVKG
NT seq 672 nt   +upstreamnt  +downstreamnt
atgctgcattctggttcccgcaacatcggcaataaattagcacagtgccacattaacaca
gctaaagaattagcaaaaatggcgggtaataaattgcctgatcctaatttggctcatttt
gtcgctggtacaccagaattccaggcatactggcacgatttgcagtgggcacagaattat
gcgcgtttcaaccgtgaggtgatgatggcgcgtttccaacgcatcgtcgagaaacatctg
gcgggtggtaaggcgactaagcctttattagaagtgaattgccatcacaattacgctgaa
aaagaagtgcattttggcgaggatgtctacgtcactcgtaaaggtgcagtccgcgcaaca
gaagaagactatggcattattccgggttcaatgggggctaaatcctacattgttaagggt
aaaggttctgccaatagtttttgcagttgttcgcacggtgcaggacgtttactgtctcgt
gcgaaggcaaaaaatgtctacacattagatgatttaattgagcaaacaaaaggcgtagag
tgccgtaaagatacaggcgttttggatgaaattccaggcgcttacaagccgatagaagaa
gttatggagaatcaagcggatttagtcgaagttgtagcaactttgaagcaagttgtttgc
gtgaagggttaa

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