Kalymmatonema gypsitolerans: NIES4073_58450
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Entry
NIES4073_58450 CDS
T10147
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
scys Kalymmatonema gypsitolerans
Brite
KEGG Orthology (KO) [BR:
scys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scys03032
]
NIES4073_58450
03400 DNA repair and recombination proteins [BR:
scys03400
]
NIES4073_58450
Enzymes [BR:
scys01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NIES4073_58450
DNA replication proteins [BR:
scys03032
]
Prokaryotic type
DNA Topoisomerases
NIES4073_58450
DNA repair and recombination proteins [BR:
scys03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NIES4073_58450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
BAZ24944
LinkDB
All DBs
Position
complement(6423663..6425837)
Genome browser
AA seq
724 aa
AA seq
DB search
MPKRLLVVESPGKVKKLSQILGSEWIVRASCGHIRELSDEGEDSLGFTLDGSSVQCRYVP
RNQQAKETIQQLKAAVRQVKEVVLATDPDREGETIAWHLKEALGLKEPKRVVYTEITESA
VKSAIANPRELDLNLVGAGLCRDCLDKLVGYKGSPLVWALNNGAKSVGRVQSATLHLICQ
REREIQSFVPQDYWSVWVDYAEGFRAFYKGKVDTPSEAPQEAEVHDDAAVNSTQATESTR
VLSEAEATHLVEEAKRYPHQIVQFEGKIVNRQPPPPFITSTLQQAAGSRLKFAPEKTMQV
AQKLYEAGLITYMRTDSVMLSPEFCASARKWLEQNDPENVPPSVTRHRSNKTAQEAHEAI
RPTDVFRPSTELRVQLSTDEFNLYVLIWKRAIASQCRPAQLRKTLVITQSGQILWQARGQ
VIEFYGYARYWSNLSKDTMLPNLQQGQILTLENAGHEKKKTQPPPRYSEPKLVQLMERKG
IGRPSTYSPTIATLKKRSYVQLTKENLQPTTLGLEVDAFLQKALPDLLQTEFTAKMEDAL
DAIASGKQPWQHYLTNWNQNYFAPALAKAKTVVVSSVVSSSNGAKASPVAERKYQTSRTR
CPQCKNYLAKIPSNKVTKKYFLKCLSGCEDTVLFWSDRTKTWEAPRSQAAKSGNSAKAPV
NITTYPCPVCKKPLEEYSYTKDGQSKTMLRCSDYKSRNDQKHKDVAYFTTAKGWWSPKFG
ELKC
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacgccttctagtggtcgaatcccccggtaaagtcaaaaaactcagtcaaatt
ctgggatcggagtggattgttcgtgctagttgcggtcacattcgagaactcagcgatgaa
ggtgaagattcgctgggttttaccctggatggcagcagtgtacaatgtcgctatgtaccc
cgcaaccagcaagcaaaggaaacgattcaacaacttaaggctgcggttcgccaggtcaaa
gaagttgtcttagcgactgatccagatcgggaaggagaaacgatcgcttggcatctcaag
gaagctttgggtttgaaggaaccgaaacgagtcgtctacacggagattactgagtctgcg
gtgaaaagtgcgatcgccaatcccagagaacttgaccttaacttggtgggagcaggattg
tgtcgcgactgtcttgacaaactcgtcggttacaagggaagcccgctggtttgggcgttg
aataatggcgcgaagagtgtcggacgcgttcaaagtgctaccctgcacctgatttgccag
cgcgagagggaaattcagtcttttgtcccgcaagattattggagtgtctgggttgattat
gctgaaggattccgcgctttctacaaaggtaaggtggatacgccgtcggaagcaccacag
gaagcggaagttcatgatgacgccgcagttaacagcacacaagcaaccgagtctactcgc
gttctttcggaagcagaagcaacacacttagttgaggaagcgaaacgctatcctcaccaa
attgtccaattcgaggggaaaatcgtcaaccgccaaccacctccaccgtttatcacttct
actcttcagcaagctgctggttcgaggttgaaatttgctcctgaaaaaactatgcaggtg
gctcaaaagttgtatgaggcggggttaattacatatatgcggacagattcagttatgctg
agtccagagttctgcgcgagtgcccgcaagtggttagagcagaatgacccagaaaatgtg
ccgccttctgttaccagacatcgtagcaataaaacggctcaggaagcccatgaggcaatc
cgaccaacggatgtgtttcgtccttcaactgaattgcgagtacaactttctacagacgag
tttaacctgtatgtgctgatttggaaacgggcgatcgcctcccaatgtcgcccagcccaa
ctccggaaaactcttgtcatcactcagtctggtcaaattctctggcaagcaagaggacaa
gtcatagagttttacggttatgcccggtactggtcgaacctcagcaaggatacaatgctg
ccaaacttgcaacaagggcaaatcctaactttggagaatgcaggtcacgagaagaaaaag
acccagccaccaccccgctacagcgaaccaaaactggtacaactgatggagcgtaaaggc
attggtcgtcctagtacttattctcccacaattgcgacgcttaaaaaacgaagttatgtc
cagctcacaaaagaaaatctacagccgacaactttagggctagaagttgatgcttttttg
cagaaggcattaccagatttgttgcaaacagaattcactgcaaagatggaagatgccttg
gacgcaattgcttccgggaaacagccttggcagcactacctgacaaattggaaccagaat
tattttgcaccagctttggcaaaagcaaaaactgtcgttgtcagttcagttgtcagttca
tcaaatggggcgaaagcatctcctgtagctgaacgcaaatatcagacttccagaactcgt
tgccctcagtgtaagaactacttagcgaaaattcccagcaataaggttacaaagaaatac
tttctcaaatgcctcagcgggtgtgaagataccgtcctattttggagcgatcgcactaag
acttgggaagcacctcgttctcaagcagccaaatcaggaaattccgcaaaggctccagtc
aatataacgacatatccatgcccagtgtgtaagaaacctctggaagagtacagttatacg
aaagacggacagagtaagacaatgctccgctgttccgattataagtcccgaaatgaccag
aaacataaggatgtggcttattttaccactgcaaaagggtggtggagtcccaagtttggg
gagttgaagtgttaa
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