Kalymmatonema gypsitolerans: NIES4073_60140
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Entry
NIES4073_60140 CDS
T10147
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
scys Kalymmatonema gypsitolerans
Pathway
scys00260
Glycine, serine and threonine metabolism
scys00460
Cyanoamino acid metabolism
scys00630
Glyoxylate and dicarboxylate metabolism
scys00670
One carbon pool by folate
scys00680
Methane metabolism
scys01100
Metabolic pathways
scys01110
Biosynthesis of secondary metabolites
scys01120
Microbial metabolism in diverse environments
scys01200
Carbon metabolism
scys01230
Biosynthesis of amino acids
scys01240
Biosynthesis of cofactors
scys04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
scys00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NIES4073_60140
09102 Energy metabolism
00680 Methane metabolism
NIES4073_60140
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NIES4073_60140
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NIES4073_60140
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NIES4073_60140
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NIES4073_60140
Enzymes [BR:
scys01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NIES4073_60140
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
BAZ25110
LinkDB
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Position
complement(6622941..6624224)
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AA seq
427 aa
AA seq
DB search
MTLTNSDFLASSDPAVAELINQELQRQRDHLELIASENFTSAAVLAAQGSILTNKYAEGL
PGKRYYGGCEFVDKIEQVAIDRAKQLFGAAHANVQPHSGAQANFAVFLTLLEPGDKFLGM
DLSHGGHLTHGSPVNVSGKWFSACHYGVNQQTEQLDYDQIRELALRERPKLLICGYSAYP
RIIDFEKFRSIADEVGAYLLADIAHIAGLVATGHHPNPIPYCDVVTTTTHKTLRGPRGGL
ILTRDPELGKKLDKSVFPGNQGGPLEHVIAGKAVAFGEALKPEFKVYSAQVIENARALAT
QLQNRGLKLVSNGTENHLMLVDLRSISLTGKQADQLVSGVNITANKNTVPFDPESPFVTS
GLRLGSPAMTTRGLGVEEFTEIGNIIADRLLNPDSAEITQDCRRRVKALCDRFPLYPHIE
IPVPVLA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
gtgactctgactaactcagattttcttgcctcctccgaccctgctgtggcggagttaatc
aaccaagagctgcaacgccaacgcgaccacttggagttgattgctagtgaaaactttacc
tctgccgctgtactagcagctcagggttccatactgacaaataaatatgcagaaggatta
cctggtaaacgctactatggcggttgtgagtttgtagataaaattgagcaagtggcaatt
gaccgtgccaaacaattgtttggtgctgctcatgccaatgtccaaccccattctggcgca
caggcgaattttgcagtgtttttgacgctgctagaaccaggagataaattcctcggaatg
gatttgtctcatggaggacatttgacccacggttcgcctgttaatgtatccggtaagtgg
ttcagtgcttgccattacggcgttaatcaacaaacagaacaactcgactatgaccaaatt
cgggagctggcgcttagggagcgtccaaagcttttgatttgtggttattcggcatatccc
cgcatcatcgactttgaaaagttccgcagtatcgccgatgaagttggcgcatacttactg
gcagatattgcccatattgccggtttggttgcgactggtcatcaccccaaccctattccc
tattgtgatgttgtgaccacaacgacacacaaaactctacgcggtcctcggggtggctta
atcttgacccgcgacccggaactaggtaaaaaactggataaatcagttttccctggtaat
caaggtggacctttggaacacgtcatcgctggtaaagcagtcgcttttggcgaagcccta
aagccagagtttaaagtctattctgcccaagtgattgaaaatgcccgcgctttggctacc
caactccaaaaccgaggcttaaagctagtgtcaaatggcactgagaaccatttaatgcta
gttgatctgcggtctatcagcttgacaggtaagcaagcagatcagttggtgagtggtgtc
aatatcaccgccaacaagaacacagttcccttcgatccagagtcaccatttgtgacgagc
ggtttaaggttgggttccccagccatgacaacgcggggtttgggagttgaagaatttacg
gaaattggcaatattattgccgatcgcctgttaaatccagattcagcagagattacccaa
gattgtcgccgacgggtcaaagcgttgtgcgatcgcttccccttgtatcctcacatagag
attccggtaccagtgttagcgtga
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