Kalymmatonema gypsitolerans: NIES4073_62380
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Entry
NIES4073_62380 CDS
T10147
Name
(GenBank) ATP-dependent DNA helicase, Rep family protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
scys Kalymmatonema gypsitolerans
Pathway
scys03420
Nucleotide excision repair
scys03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scys00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NIES4073_62380
03430 Mismatch repair
NIES4073_62380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scys03400
]
NIES4073_62380
Enzymes [BR:
scys01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NIES4073_62380
DNA repair and recombination proteins [BR:
scys03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NIES4073_62380
MMR (mismatch excision repair)
Other MMR factors
NIES4073_62380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
DEAD
AAA_12
ResIII
Mov-10_helical
SinI
Motif
Other DBs
NCBI-ProteinID:
BAZ25333
LinkDB
All DBs
Position
complement(6888196..6890532)
Genome browser
AA seq
778 aa
AA seq
DB search
MTTTTDFLSHLNPSQRRAVEHHCGPLLVVAGAGSGKTRALIYRIANLILQHRVDPENILA
VTFTNKAAREMKERIQKLFADRLAMTEYNERFDLLPEYDQTKLKSKVWRTFIKDMWCGTF
HSLFSRVLRFDIDKYQDEKGRQWTRNFSIFDESDAQSLVKEIVTKQLNLDDKKFEPRSVR
YAISNAKNQGLSPKEFEREQPNYRGRVIAEVYNHYQSRLAENNALDFDDLILVPVRLFQQ
NEQVLGYWHNKFRHILVDEYQDTNRTQYELIRLLTTNGETKKSEWDWTDRSVLVVGDADQ
SIYSFRMADFTILLDFQQDFGDGLPDEDTRTMVKLEENYRSCENILQAANHLIENNTQRI
DKILKATRGAGEEIFCHKADDEIAEADFVINQIRSLENQNPELNWGSFAILYRTNAQSRP
FEELLVRLGIPYTVVGGIKFYDRKEIKDVLAYLRAIANPADTLSLSRVINTPRRGIGKAT
IEALNNAARELGTTLWEIISDETSVNTLAGRSAKAVNNFAQMIRNLQEQMETVPVSELVQ
GVLEDSGYLKDLQTQGTEEAEDRVQNVQELFNAVLQFEEESDDVTLQAFLSSTALSSDLD
NLKEGETAVSLLTLHASKGLEFPVVFLVGMEQGLFPNYRSMNDPASLEEERRLCYVGITR
AQERLYISHARERRLYGSREPAMRSQFLDELPEELLMTRHRSVAYTKGTGGSSSQRVTQA
KQGSAHWQVGEKVLHKIFGVGEITHIFGSGNKISLAIKFDSMGQKIIDPRVAQLQRVD
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaaccacagacttcctcagtcacctcaaccccagtcaacgccgtgctgttgaa
catcactgcggtcccttactagttgttgctggtgcgggttccggcaaaacacgagcgctg
atttatcgcattgctaaccttattttgcaacaccgcgtcgatccagaaaatatcttggcg
gtgacgttcaccaacaaagccgcacgcgaaatgaaagagcgtattcagaagttatttgcc
gatcgcctggcaatgacagaatacaatgagcggtttgatttgttaccagaatacgaccaa
accaagctgaagtcgaaagtctggagaaccttcatcaaagatatgtggtgcggtactttc
cacagtcttttttctcgcgttctccgctttgatatcgataaataccaagacgaaaaagga
cgccagtggacgcggaatttttctatctttgacgagtccgacgcccaaagccttgttaaa
gaaatcgttactaaacagctcaacttagacgacaagaagtttgaaccccgttctgtgcgc
tacgccattagtaacgccaaaaaccaagggttatcacctaaagaatttgagagagaacag
ccgaattatcgcggcagggtgattgcagaagtttacaatcattatcaaagccgacttgca
gaaaacaacgccttggactttgatgaccttatcctcgttcctgtaagattgtttcagcaa
aacgaacaagtcttgggttattggcacaacaagtttcgccatattctggtagatgaatat
caggatactaaccgcactcaatacgaactcatccgcctgttgacgacaaatggcgaaacc
aaaaagagtgaatgggattggacagaccgttctgttttggtggttggtgatgcagatcaa
tcgatttattcgtttagaatggctgacttcaccatcttgttggactttcagcaagatttt
ggtgatggtttaccagacgaagacacccgcacaatggtgaagttggaggagaattatcgc
tcttgcgaaaatattttgcaagcagcaaaccatctgattgaaaacaacacccaacgcatt
gataaaatcctcaaagcaacaagaggcgcaggtgaggaaattttttgtcataaagcagat
gatgaaattgcggaagcagattttgtcatcaatcaaattcgctctttagaaaaccaaaat
cctgagttgaattgggggagttttgccatactttatcgtaccaacgcccaatctcgaccg
tttgaggagttattggtgcgattgggaattccctacacagttgtgggaggaataaagttt
tacgatcgcaaagaaattaaagatgtcttggcttacttgcgggcgatcgccaaccctgct
gatacactcagtttatcgcgagtgattaatactccccggcgcggtattggcaaagcgacc
atcgaggcactaaataacgccgctagagaattaggcacaactctgtgggaaatcataagt
gatgagacatcagtaaatacattagctgggcgttctgcgaaagctgtcaataactttgcc
cagatgattcgtaacttgcaagaacaaatggagacagttccagtttctgaacttgtgcaa
ggagtgctggaagactctggataccttaaagacttgcaaacacagggaacggaagaagca
gaagacagggtgcaaaacgtccaagaattattcaacgccgtgctgcaatttgaagaagaa
agcgacgatgtcaccctgcaagccttccttagcagtaccgccctcagttccgatttggat
aatttaaaagaaggagaaacagcagtttcactgttaaccttacacgcttccaaggggctg
gagtttcctgtggtgtttttggtggggatggaacagggattgtttcccaactaccgttcg
atgaacgatccagcgtctttggaagaagaacgccgcctgtgttacgtggggattactcgc
gcccaagaacggttgtacataagccatgcccgtgaacgccgcctttatggttctcgggaa
ccagccatgcgatcgcaatttctcgacgaactacccgaagaattattaatgactcgacat
agaagcgttgcttataccaaaggtactggtggcagttcatcccagcgtgtcacccaagca
aaacaagggagtgcacattggcaagtaggcgaaaaagttctgcataaaatctttggtgtt
ggagaaattactcacatttttggttcgggaaataaaatttcattagcgattaaatttgac
agtatgggacaaaaaattattgatccaagggtggcacagttgcaacgggtggattga
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