Scytonema sp. NIES-4073: NIES4073_65710
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Entry
NIES4073_65710 CDS
T10147
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit RpoA
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
scys Scytonema sp. NIES-4073
Pathway
scys03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
scys00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NIES4073_65710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scys03021
]
NIES4073_65710
03400 DNA repair and recombination proteins [BR:
scys03400
]
NIES4073_65710
Enzymes [BR:
scys01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NIES4073_65710
Transcription machinery [BR:
scys03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NIES4073_65710
DNA repair and recombination proteins [BR:
scys03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NIES4073_65710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
BAZ25665
LinkDB
All DBs
Position
7274461..7275408
Genome browser
AA seq
315 aa
AA seq
DB search
MAQFQIECVESNSEENRSHYSKFVLEPLERGQGTTVGNALRRVLLSNLEGTAVTAVRIAG
VSHEFATVSGVREDVLEILMKMKEVVLKSYSAQPQIGRLLVTGPTTITAAHFDLPSEVEV
IDPTQYVATIAEGGKLEMEFRIERGKGYRTVERSREEATSLDFLQIDSVFMPVRKVNYSV
EETRGDTGIPKDRLLLEVWTNGSLSPQEALSSAATILVDLFNPLKDISLDTPDIGAEVSE
DPTAQIPIEELQLSVRAYNCLKRAQVNSVADLLDYTQEDLLEIKNFGQKSAEEVVEALQR
RLGITLPTERASKHT
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcagtttcaaattgaatgtgtagagtcaaattctgaggaaaataggagccactac
agtaaatttgtcttggaacctctcgagcgtggtcaaggaacgacagttggcaatgccctg
agacgggttttactgtctaacctagagggtacagcagtcacagcagttcggattgcgggc
gtttcacacgagtttgccacagtttcgggcgtacgggaagacgtgctggaaatcctaatg
aaaatgaaggaagtcgtcctcaaaagctattctgctcaaccccagattggtcgcttactc
gttacaggtccaacaacaattactgcggcacattttgatttgccaagtgaagtcgaagtc
atcgatccgacccagtatgtagccaccatagctgaaggtggcaagctggaaatggagttt
cggattgaaagaggcaaaggatatcgcactgtagaacggagtcgtgaagaagcgacatcg
ttggacttcctgcaaatcgactcggtatttatgccagtgcggaaagtgaactacagcgtt
gaggaaacccgtggagatactgggataccaaaagaccgtctgctgttggaagtttggaca
aatggcagtctaagcccccaagaagcactgtcttctgccgcgactatcctggtggatcta
ttcaatccgttgaaagatatctcgcttgatacaccggatataggcgcagaagtctcagag
gacccaactgcccaaattccaattgaagagttgcaactttctgtgcgagcctataactgt
ctcaaacgggcacaagttaactctgttgctgatttgttggattacacccaagaagacctg
ttagaaattaaaaacttcggtcagaagtcagctgaagaagttgttgaagctttacagcga
cgcttgggaattaccctgccgactgaaagggcttccaaacacacctaa
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