Kalymmatonema gypsitolerans: NIES4073_72090
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Entry
NIES4073_72090 CDS
T10147
Name
(GenBank) ribonuclease E and G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
scys Kalymmatonema gypsitolerans
Pathway
scys03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scys00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NIES4073_72090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scys03019
]
NIES4073_72090
03009 Ribosome biogenesis [BR:
scys03009
]
NIES4073_72090
Enzymes [BR:
scys01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
NIES4073_72090
Messenger RNA biogenesis [BR:
scys03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NIES4073_72090
Ribosome biogenesis [BR:
scys03009
]
Prokaryotic type
rRNA processing factors
NIES4073_72090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
BAZ26303
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All DBs
Position
7990843..7992933
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AA seq
696 aa
AA seq
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MPKQIIIAEQHQIAAVFSEDQIQELVVATGHHQIGDIYLGVVENVLPGIDAAFVNIGDPE
RNGFIHVTDLGPLRLRRTAAAITELLTPQQKVLVQVMKEPTGTKGPRLTGNITLPGRYVV
LMPYGRGVNLSRRIKSESERNRLRALAILIKPAGMGLLVRTEAEGKPEEAIIEDLESLQR
QWEAIQQEAQSTRPPALLNRDDDFIQRVLRDMYGADVNRIVVDSSTGLKRVKQYLQNWSG
GQTPQGLLIDHHRDRAPILEYFRINAAIKEALKPRVDLPSGGYIIIQPTEALTVIDVNSG
SFTRSATARETVLWTNCEAATEIARQLRLRNIAGVIVVDFIDMESRRDQLHVLEHFNKAL
KADKARPQIAQLTELGLVELTRKRQGQNIYELFGKLCPTCGGLGHTVHLPGETESRPLAP
TELPERLVSSVPHREPRLPVARSVEPRETYEGYGEAYETDNDLSASGLVNHPSYQEIGDS
RKRRTRRSTRVERVNGGNGKDEPRIVANPLAFLNEPDLEMDDDVEQGAPSEVPPPSFSKP
SWGDRAERGKVTKVELVKPVVEPPEIVTVEMSPEEQDVYAQMGVSPLEKLGREVRNPKSV
IINVTLPGHNPAPATESTSEPPVSERAPVSERAPVSERAPVSERASAVVTVVEPPSEPEP
EAVTERQDLDLMTDESEASSNLSDKRRRRRRSSSVE
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacaaattatcatcgcggaacagcatcaaattgctgcagtattttcggaagac
caaatacaagaactcgttgttgccacaggtcatcaccaaattggtgatatctacctaggg
gttgtggagaatgtactacctgggatagatgcagcttttgtcaatattggtgatccagag
cgcaatggttttattcatgtcactgacttaggaccattaaggctgaggcggacagcagca
gctattacagaattattaacgccgcagcaaaaagtattagtgcaagtgatgaaagagcca
acgggtaccaaaggacccaggctcacgggaaacatcaccttacccggacgctacgtagtg
ctgatgccatacggtcggggtgtaaatttatcacgtcggattaaaagtgaaagcgagcgc
aaccgtttacgtgcgctggcaattttaattaaaccagcaggaatgggtttgctggttcgt
accgaagccgagggcaagccggaagaagcgattatcgaagatttagaatcgctgcaaagg
caatgggaagcaattcaacaagaagcgcaatcaacacgtcccccagcgctcttgaatcgg
gacgatgattttatccagcgcgtgctgcgggatatgtacggcgcagatgtcaatcggatt
gtggtagattccagtactggtttgaagcgggtgaagcagtacttgcagaactggagtggc
gggcaaacaccacaagggttgttaatcgaccatcaccgcgatcgcgctccgatattagag
tacttccgtattaatgctgcaattaaagaagcgctcaaacctagagtagacttaccttct
ggaggctacattattattcagccgacagaagcattaacagtcatagatgtcaactccggc
tcattcacgcgatcggcaactgctagggaaactgttttgtggacaaactgcgaagccgcc
acagaaattgcccgtcagttgcggctacggaatattgcgggggtgattgtcgttgatttt
attgatatggaatcgcggcgtgaccaactacacgttctagaacattttaataaagcactc
aaagcagacaaagctcgtcctcagattgcccaacttactgagttgggtttagttgaactc
acccgcaagcgtcaaggtcaaaacatttacgaattgtttggtaaactttgccccacttgt
ggtggtttagggcatactgtccatttacctggagaaacagaaagccgaccactagcacca
acagaattaccagagcgccttgtatcctccgtgcctcatagggaaccacgtctgccagtt
gctcgatcggttgaaccacgggaaacctatgaaggatatggagaagcatacgagactgac
aatgacttgagtgcctcgggtctggttaatcatcccagctatcaagaaattggcgacagc
agaaagcgtcgtacccgccgcagcactcgcgtagagagggtaaatgggggaaatggcaaa
gatgagccacggattgtggcaaaccccctggcgtttctgaacgagccagacttggaaatg
gatgacgacgtggaacaaggagcgccatcagaagtacctccacccagttttagcaaacct
tcttggggtgatagagccgagcgtggcaaagtgactaaggtagagctagtcaagccagtg
gtagaaccaccagaaattgtgactgtagaaatgtcgcccgaggaacaggatgtctacgcc
cagatgggagtttctccgttagagaagttgggtcgggaggtcagaaatcccaagtctgtg
attatcaacgtcaccttacctgggcacaaccctgctccagcgactgaatcaacctcagaa
ccacctgtttctgaaagagcacctgtctctgaaagagcacctgtctctgaaagagcacct
gtctctgaaagagcaagcgctgttgtcacagtagttgagccaccaagcgaacccgagcca
gaagctgtaactgagcgacaggatcttgacttgatgacggatgaaagtgaagctagcagc
aacttaagcgataaacgccgccgtcgccgccgttcttcctctgtggagtaa
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