Kalymmatonema gypsitolerans: NIES4073_72880
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Entry
NIES4073_72880 CDS
T10147
Name
(GenBank) DNA-directed RNA polymerase subunit gamma
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
scys Kalymmatonema gypsitolerans
Pathway
scys03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
scys00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NIES4073_72880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scys03021
]
NIES4073_72880
03400 DNA repair and recombination proteins [BR:
scys03400
]
NIES4073_72880
Enzymes [BR:
scys01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NIES4073_72880
Transcription machinery [BR:
scys03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NIES4073_72880
DNA repair and recombination proteins [BR:
scys03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NIES4073_72880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
BAZ26382
LinkDB
All DBs
Position
8095812..8097689
Genome browser
AA seq
625 aa
AA seq
DB search
MRSAQNNQFDYVKIGLASPERIRVWGERTLPNGQVVGEVTKPETINYRTLKPEMDGLFCE
RIFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGYIKLAAPVAHVWYLKG
IPSYISILLDMPLRDVEQIVYFNSYVVLSPGNAETLTYKQLLSEDQWLEIEDQIYSEDST
LQGVEVGIGAEALLRLLADINLEQEAESLREEITTAKGQKRAKLIKRLRVIDNFVATGSK
PEWMVMTVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVR
NEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRS
VIVVGPKLNIHQCGLPREMAIELFQPFVINRLIRSGMVNNIKAAKKLISRSDPSVWDVLE
EVIEGHPVLLNRAPTLHRLGIQSFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHVPLS
LESQAEARLLMLASNNILSPATGRPIITPSQDMVLGAYYLTAENPNATKGAGRYFASLSD
VIMAYEQQQIDLHAYIYVRYDGEVESPEPDTEPVEVIPNDDGTRTLLYKFRRVREDAQGN
MMSQYVRTTPGRVIYNNAIQEAIAS
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgagatcagcccaaaataatcagtttgactacgttaaaatcggcttggcatcaccagaa
cgcattcgggtctggggtgagagaactttacctaacggtcaggtagttggtgaagtcaca
aagccagagacgataaattaccgtactttaaaaccagagatggatggcttgttctgcgag
cgcatctttggaccagctaaagattgggaatgccattgtggcaagtataagagagtacgt
cacagaggcattgtctgcgaacgctgtggtgtggaagtcactgaatcgcgagtacgccgc
caccgcatgggctacattaaactcgccgcaccagtcgctcacgtttggtatctcaagggc
attcccagctatatctccatcctgttggatatgcctttgcgggatgtggagcaaattgtt
tatttcaattcctatgttgttcttagtcctggcaatgctgaaaccttaacttacaaacag
ttgctgagtgaagaccagtggctggaaatcgaagaccaaatttatagcgaagattctacg
cttcaaggggtagaagtcggcattggtgcagaagccttgttgcgcttgctggctgatatc
aacttagagcaagaagccgaatctttgcgggaagaaattacaaccgccaaaggtcagaag
cgggcgaagctgattaagcggctgcgggtgattgacaacttcgtcgccacaggttctaaa
ccagaatggatggtgatgaccgtgatccccgtgattcccccagacttgcgcccgatggtg
cagttagacggtggacgatttgccacaagcgatttgaacgatttgtatcgccgggtgata
aaccgcaacaaccgtcttgcccgcctgcaagaaattttggctcctgagattattgttcgt
aacgaaaagcggatgctgcaagaagcggtggatgctttaattgacaacggtcgtcgggga
cgaaccgtagtaggggcaaataaccgaccgctgaagtctttgtcagacattattgaaggg
aaacaaggacgtttccggcaaaacttgctcggtaaacgggttgactactcaggacgttcc
gtaattgtggtaggaccaaagctgaacatccaccagtgcggtttgccacgagaaatggca
attgagctatttcaaccgtttgtcattaaccgactgattcgcagcggcatggtgaacaat
atcaaagccgcgaaaaagctgatatctcgctctgatccaagtgtttgggatgttctggaa
gaagtgattgaaggacacccagttttactgaaccgtgcgccgacactacaccgtttgggt
attcaatcttttgagccaattttggtcgaaggtagagcaattcagctacacccactcgtt
tgtccagcatttaacgctgactttgacggcgaccaaatggcggtacacgtaccgttatct
ttggaatctcaagcagaagcgcggttactgatgctggcgtctaacaacattttgtcacca
gcgactggtagaccaatcattacacccagccaagacatggtgttaggggcgtattactta
accgcagaaaatcccaatgcgacaaaaggcgcagggcggtactttgcttctcttagtgat
gtgattatggcttacgagcagcagcaaatcgacctacacgcctatatctacgtgcgttac
gacggcgaagtagagtcacctgaaccagatacagaaccggttgaagtgataccaaatgac
gatggtacccggactttgctgtataagttccgccgagtcagagaagatgctcagggaaac
atgatgtctcagtatgtacgtacaactccaggtcgcgtaatttacaataacgcgattcaa
gaagcgatcgccagctag
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