Kalymmatonema gypsitolerans: NIES4073_74330
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Entry
NIES4073_74330 CDS
T10147
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
scys Kalymmatonema gypsitolerans
Brite
KEGG Orthology (KO) [BR:
scys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scys03400
]
NIES4073_74330 (radA)
DNA repair and recombination proteins [BR:
scys03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NIES4073_74330 (radA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
DUF7125
AAA_16
Lon_C
nSTAND3
nSTAND_NTPase5
GvpD_P-loop
AAA_29
NTPase_1
AAA_22
ATPase_2
AAA_14
MCM
ABC_tran
AAA_5
AAA_24
AAA
DZR
NACHT
zf-RING_10
PAXNEB
zinc_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
BAZ26525
LinkDB
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Position
complement(8274134..8275678)
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AA seq
514 aa
AA seq
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MAKPKSYFVCNECGAESPQWFGKCAACGTYNSLEEQISIQSSTDIPSRGMSGWHQQTNNK
PAATKPAKPRASLTFDQISDRQVTRWASGYEELDRVLGGGVVPGSMVLIGGDPGIGKSTL
LLQVSNLLSHRYRILYVSGEESGQQVKLRASRLGVGKPLSVVGNGKDNDTAAKEAPEEIA
KVEEADSIGADLYVLPETDLEEILREMDSLKPNVTVIDSIQTVFFPALTSAPGSVAQVRE
CTAALMKVAKHEDITMLIVGHVTKEGAIAGPKVLEHLVDTVLYFEGDRFASHRLLRTVKN
RFGATHEIGIFEMVDNGLREVPNPSELFLGNRDDPAPGTAIVVACEGTRPIVVELQALVS
PTSYPSPRRAGTGIDYNRLVQILAVLEKRVGIPMSKLDSYVASAGGLNVEEPAVDLGIAI
AIVASFRDRIVDPGTVLIGEVGLGGQVRSVSQMELRLKEAAKLGFKRAIVPKGQKYPSLD
IEILPVSKVIDAIIAAIPQQGLTEEDLAPDDDEE
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcctaaaagttatttcgtttgtaacgaatgtggtgcagaatccccccaatgg
tttgggaagtgtgcagcttgcggcacttacaattctctagaagagcaaattagtatccag
tcctcaaccgatatacctagtcgcggaatgagtggatggcatcaacagacgaacaacaaa
cctgcagcaacgaaaccagccaaaccacgagcctcattgacatttgaccagattagcgat
cgccaagtcacacgctgggcttctggctatgaggaactagatcgagtcctgggcggtgga
gttgttcctggttctatggtgttgataggcggcgacccaggaataggcaaatctacactg
ctgttgcaagtatcgaatctactgtcgcacagataccgcatcctctacgtttctggagaa
gaatcaggacaacaggtaaaattaagagcttctcgtttgggggtgggaaaacccttgagt
gtagtaggcaatggtaaggacaatgatacagcagcaaaagaagctcccgaagaaattgcc
aaagtagaggaggctgacagtataggtgctgatttgtatgttttgccagaaacagacttg
gaagaaatcctccgggagatggattcacttaaaccgaacgtcacggtcattgatagtatt
caaacagtgttttttccggctttgacctctgcacccggttctgttgctcaagttcgcgaa
tgtacagcagctttgatgaaggtggcaaagcacgaagacatcacaatgttaattgtggga
cacgtgacgaaagaaggggcgatcgccggaccgaaggttttggaacatttagttgataca
gtgttgtattttgaaggcgatcgctttgcttcccatcggttattacggacagtgaaaaac
cgttttggggcaactcacgaaatcggcatctttgaaatggtagacaacgggctgcgagaa
gtccccaatccttcagagctctttttagggaaccgcgatgatccggctcccggtactgca
attgtcgttgcttgcgaaggaacacgcccaattgtcgttgagttgcaagcactagtgagt
cccaccagctacccatccccgcgtcgtgcaggcacaggtatagattataaccgcttagtg
caaattttggcagtgttagaaaaacgggtgggtatcccgatgtcgaagctagattcttac
gttgcgtctgcgggtgggttgaatgtagaagaaccagccgtggatttaggaatagcgatc
gcaattgttgccagtttccgcgacagaattgttgatcctggtaccgtactgattggggaa
gttgggctaggaggacaagtccgttcagtgtcgcaaatggaactgcggttaaaagaagca
gcaaaactgggatttaagagggcgatcgtcccaaaagggcaaaaataccccagccttgac
attgagattttgccagtgtcaaaggttatagatgcgattattgcagcgataccgcagcag
ggattaaccgaagaagatttggcacccgacgacgatgaggagtag
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