Scytonema sp. NIES-4073: NIES4073_76670
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Entry
NIES4073_76670 CDS
T10147
Symbol
nusA
Name
(GenBank) transcription elongation factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
scys Scytonema sp. NIES-4073
Brite
Transcription machinery [BR:
scys03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
NIES4073_76670 (nusA)
Ribosome biogenesis [BR:
scys03009
]
Prokaryotic type
rRNA transcription factors
NIES4073_76670 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_5
NusA_N
KH_NusA_C
KH_2
KH_1
Carb_kinase
Motif
Other DBs
NCBI-ProteinID:
BAZ26758
LinkDB
All DBs
Position
8542423..8543706
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AA seq
427 aa
AA seq
DB search
MSMVTLPGLKDLIENISRERNLPRIAVQSAIREALLKGYERYRRAQNLERKQFDEDYFEN
FDVQLDVDDEGFRVVATKTIVEEVTNSDHEIALQQVQDMGGDEAQLGQEVVLDVTPDQGE
FGRMAAMQTKQVLAQKLRDQQRQMVQEEFQDLEGTVLQARVLRFERQSVIMAVSSSFGQP
EVEAELPKREQLPNDNYRANATFKVYLKKVSQGQQRGPQLLVSRADAGLVVYLFANEVPE
IEDEVVRIVAVAREANPPSRHVGPRTKIAVDTLDRDVDPVGACIGARGSRIQVVVNELRG
EKIDVIRWSPDPATYIANALSPARVDEVRLMDPETRQTHVLVAEDQLSLAIGKEGQNVRL
AARLTGWKIDIKDKAKYDYAGEDTKFAAARAKYTPEVDDLDEEEFDDENQEELLEEEIFE
DNNDDQE
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatggttactctacccggattaaaagatttaattgaaaatataagtcgcgagcgt
aatttacctcgtattgcagttcaatcagctataagagaagcactacttaaaggttacgaa
cgttatcgtcgtgcccaaaacttggagcgaaaacagttcgatgaagattactttgagaat
tttgatgtccaactagatgttgatgatgaaggctttcgcgttgttgctaccaaaacgata
gttgaagaagtcaccaactctgaccatgaaattgctctgcaacaagttcaggacatggga
ggagacgaagcgcaattaggacaggaagtcgtattggatgtcaccccggatcaaggggaa
tttggtcggatggcggcgatgcaaaccaagcaggtgttggcgcaaaaactgcgggatcaa
cagcgccaaatggtgcaagaagagttccaggacttagaaggaacagttttacaagcaaga
gttttgcgatttgaaagacaatcggtaattatggcggtcagcagtagctttggtcagccg
gaagtagaagccgaattgcccaagcgcgaacaattgcctaatgataattatcgggcaaat
gctacgtttaaggtttatctcaaaaaagtttctcaaggtcagcaacggggaccgcagtta
ctagtatcacgagccgatgcaggtttggtggtttatttgtttgctaacgaagtgccagaa
atcgaggatgaagttgtgcggattgtggctgttgcccgagaggcaaatcccccttctcgt
catgtcggacctcggactaaaattgctgtagacactctagatcgcgatgtagatccagta
ggtgcttgtattggagcacggggatcacggattcaagtggtagtcaacgaattgcgcggc
gaaaaaatagatgtgattcgctggtctccagaccctgcgacctacattgccaatgccctc
agccccgcacgggtagatgaggttcggctgatggatcccgaaaccagacaaactcatgta
ctggtagcagaagaccaattgagtctggcgatcggtaaagaaggacaaaatgtccgttta
gcagctcgcctgacaggttggaagattgatatcaaagataaagctaagtatgattacgca
ggagaagatactaagtttgcagcagcaagagcaaaatatacaccagaagtagatgactta
gacgaagaggaattcgatgatgaaaatcaagaagaattgttggaggaggaaatttttgag
gataataatgacgaccaagagtaa
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