Kalymmatonema gypsitolerans: NIES4073_82670
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Entry
NIES4073_82670 CDS
T10147
Symbol
sbcD
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
scys Kalymmatonema gypsitolerans
Brite
KEGG Orthology (KO) [BR:
scys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scys03400
]
NIES4073_82670 (sbcD)
DNA repair and recombination proteins [BR:
scys03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NIES4073_82670 (sbcD)
Archaeal homologous recombinant proteins
NIES4073_82670 (sbcD)
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Paralog
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
HU_inhibitor
Amidohydro_2
Motif
Other DBs
NCBI-ProteinID:
BAZ27349
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All DBs
Position
9194334..9195503
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AA seq
389 aa
AA seq
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MRLIHTSDWHLGRRLKGEDRTPEIAAALDELLKQAKELQVDAVLVAGDIYDVPNPPAEAE
QVAYNFFCKLKEAKIPAVVIAGNHDSPFRIDGIAKILSYIGVQALGRPQKANKGGVINLD
TPSGKLCVAAMPFASERRLLKYEYLWTKDDLEQRQHYRYCVQKILNYLAKGFRNDSVNVV
MAHMTIEGSNRAYSEVDYYTRDTYILSGQMLPTEAQYIALGHIHKPQQISNAAPTYYSGS
LIQVDFGEAGEEKGFYLVDVEPGRPAKPEFQLLPCQKPLKVLKCDEANLEETLEANREHP
GFLKVIVELNTPKIGLAEMVRKLCPQTLIIEPKYPKSELEKRVELQEGYQFDSVQEFRRY
YLQHQGIEVPTPVLEAFKQLQQEMSDAIA
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctaattcatacatctgactggcatttaggaagacgattaaaaggcgaagaccgt
actccagaaattgccgctgcacttgatgaattgctcaaacaagccaaagagctacaagtc
gatgctgtattggtagcgggtgatatttatgatgtaccaaatccacctgctgaagctgaa
caagttgcctataattttttctgcaaactcaaagaagctaaaattccagcagttgtaatt
gctggtaatcatgactcaccctttcgcatcgatggcattgctaaaatcctgtcttatatt
ggagttcaggcattaggtagaccccagaaagcgaacaaaggcggagtgattaatctcgat
acccctagcggtaaattgtgtgtagctgcaatgccatttgcctcagagcgaagattgttg
aaatatgaatatttgtggacaaaagatgatttagaacaacgtcagcattaccgctattgt
gttcaaaaaatcctgaattatttagcaaagggatttaggaatgatagcgtcaacgtggtg
atggcacacatgacgattgaaggttctaatcgtgcttattcagaagtagattactatacg
cgagatacatatattctctctggacaaatgctgcctactgaagcccagtatattgcatta
ggtcatattcacaaacctcagcaaatatctaacgctgcaccgacttattattcaggttct
ttgattcaagttgactttggtgaagctggcgaagaaaaaggattttatttagtagatgtt
gaaccagggcgtcctgctaaacctgaatttcaacttctcccttgccagaaacctttaaaa
gtacttaaatgcgatgaagctaacttagaagaaactttagaagcgaatcgagagcatcca
ggatttttgaaggtcattgtcgagcttaatacacccaaaatcggtttagctgaaatggta
cgaaagttatgtccgcaaactttgataattgagcctaagtacccaaaatctgaactcgaa
aagcgcgttgagttacaagaaggctatcaatttgattctgtccaagagtttcgccgctat
tacttgcagcatcaaggaatagaagtaccaacaccagttttagaagcatttaagcaatta
cagcaggagatgagtgatgcgatcgcttga
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