Scytonema sp. HK-05: SAMD_01120
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Entry
SAMD_01120 CDS
T09974
Name
(GenBank) transposase, IS605 OrfB family protein
KO
K07496
putative transposase
Organism
scyt
Scytonema sp. HK-05
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
SAMD_01120
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Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
Zn_ribbon_8
DUF4612
Motif
Other DBs
NCBI-ProteinID:
BAY42535
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Position
complement(114678..116096)
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AA seq
472 aa
AA seq
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MSLIAAYNRNLFNLRSLIRILNHSVFIFCTHKLPIFVILTNNKEVIKLLKAVKVRLYPTT
EQEITLAKSFGCARWYWNYVLNACIQHYEETGQSLKLSVYKAYLPQLKLEHPWLKEDCYS
AVLQCVAINLNKAYTNFFEGRAKFPRFKSKHHKQSIQYPQNVKIVENCLEIPKIGVVKAV
FHRPIEGKVKTVTISKTPTDKYFASILCETEEAVRCAGSPTCSICRDGTNQPTGGKTLGI
DLGLKDFAIVHDGEQVTKYSNPKYLKRHEKNLARKQKKFARVETRHGASVQESNSRNKYR
KLIAKVHERVSNSRQDFLHKLSRKLVDDSQVIIVENLNVKGMVQNRKLSKSISDVGWGMF
VNFLDYKLKQKEGRLVEIGRFFPSSKTCSSCDHVLDELTLDIREWACPKCKAHHDRDGNA
ALNIRNEGLRILSMDGGNPVLAMPRRSKTNKPKGRKASVNDAGSLHCTLRSV
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
gtgtctttgattgctgcgtataatcgcaacttatttaatctgcgttcactcatacgcatt
ttaaaccattctgttttcattttttgtacccacaaattaccaatttttgttatactaaca
aataacaaggaggtgataaaattgttgaaagcagtaaaggttagactatacccaacaact
gaacaagaaataactctagccaagtcgtttggttgtgcaagatggtattggaactatgtc
cttaatgcttgcattcaacattatgaagaaaccggccaatcattaaaactaagtgtatat
aaagcttacttacctcagttaaagctagaacatccttggttaaaagaggattgttattct
gctgttttacagtgtgtagcaatcaatttgaataaggcttacacaaacttttttgaaggt
agagctaagtttcctaggtttaaatcaaagcaccacaagcaatcaattcagtatccccaa
aacgttaaaattgtagagaattgtctggaaattcctaaaattggagttgttaaagcagtc
tttcatcgacccattgaaggtaaagttaagactgtcaccatcagtaaaacacccacagat
aagtacttcgcttccatcttgtgtgaaacagaggaggcagtgcgttgcgcgggttccccg
acttgtagcatttgccgtgatggtacaaatcaaccaactggtggtaaaacattgggaatt
gatttgggattaaaagactttgccattgttcatgatggagaacaagttaccaagtattca
aacccaaaatacctgaaacgtcatgagaagaatctagccaggaaacaaaagaaatttgcc
cgtgtagagacgcgccatggcgcgtctgtacaagaaagtaattcaagaaacaaatataga
aaactaatagccaaggttcatgaacgagtatcaaattcccgtcaggacttcctacacaag
ttaagcaggaaactggtagacgatagccaagtcatcattgtagaaaatctcaatgtgaag
ggaatggtacagaatcgtaagctatcaaagtcgatatccgatgtaggttggggaatgttt
gtcaatttccttgattacaagttgaaacagaaagaggggcggcttgtagagattggaaga
tttttccccagttctaaaacgtgttcatcgtgtgatcatgttcttgatgagttaacactc
gatatccgtgaatgggcttgccccaagtgcaaggctcatcatgaccgtgatggtaatgca
gcattgaacatcaggaatgagggacttcggatattatctatggacggagggaaccccgtt
cttgccatgccgaggcggagtaagactaataagccgaaaggtagaaaagcatctgtcaat
gacgctggaagcctacactgtaccctcaggtcagtgtag
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