Scytonema sp. HK-05: SAMD_01890
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Entry
SAMD_01890 CDS
T09974
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
scyt
Scytonema sp. HK-05
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scyt03032
]
SAMD_01890
03400 DNA repair and recombination proteins [BR:
scyt03400
]
SAMD_01890
Enzymes [BR:
scyt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SAMD_01890
DNA replication proteins [BR:
scyt03032
]
Prokaryotic type
DNA Topoisomerases
SAMD_01890
DNA repair and recombination proteins [BR:
scyt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SAMD_01890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BAY42611
LinkDB
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Position
215510..218092
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AA seq
860 aa
AA seq
DB search
MTTSQERIIPTDLRIEMSRSYLEYAMSVIVGRALPDARDGLKPVHRRILYAMHELGLSAD
RPFRKCARVVGEVLGKYHPHGDTAVYDALVRMAQDFSMRFPLIAGHGNFGSVDNDPPAAM
RYTECRLEALTSDALLQDIESETVDFIDNFDASQQEPTVLPARIPQLLLNGSSGIAVGMA
TNIPPHNLGELIDGLVALIENPEITDIQLMQYIPGPDFPTGSQILGTTAIKEAYTTGRGS
ITMRGVATIETIEQRGRPDRDAIIITELPYQTNKAALIEKIAEMVNEKRLEGIADIRDES
DRDGMRVVIELKRDAYPRVVLNNLYKQTPLQANFGANMLALVNGEPQILTLKEFLQVFLD
FRIEAITRRTRYELRKAEERDHILQGLLIALLHLDEIISLIRNASDAPTAKGELITTYGL
SEAQADAILQMQLRRLTALEADKIRSEHEELQAIIANLQDILARRERILEIIQNEVTQLK
QKHATPRRTVISPLEGEIDERDLIANEKALILLTEQGYIKRMPVSTFEAQSRATRGKAAA
KIKEDDNVEHFLTCCDHDSILFFSERGVVYCLKAYQIPVGSRTSRGTPIVQMLPIPKEEK
ITSIVPVDEFSSDEYLVMLTKGGNIKKTELAAFSNIRANGLIAISLEEGDQLRWVRRARV
EDSVIIGSRQGMAIHFRCTHEQLRPLGRATRGVKSMKLRKGDELVGMDILPAAILATLDT
DTEAEIEEIETEEIENEESTEVPGNGSTGPWALVITMGGYGKRVPVAQFRLQNRAGQGLT
ATKFKNRKIKDQLATLHIVNSDDEIMMVTSRGIIIRQAVNAISVQSRSATGVRVQRLDED
DVITGVAIVPPDTGDAAEAE
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgacaacctctcaggagaggattatcccaacagatctgcggattgagatgtcccggtca
tatctggaatacgcgatgagcgtaattgtaggtcgggcactaccagacgccagggatggt
ctgaaacctgtgcatcgtcgcattctctacgcaatgcatgaactagggttaagcgctgat
cgcccctttcgtaaatgcgctcgtgtggtaggggaagtattgggtaaatatcatccccac
ggcgacacagcagtctatgacgctttggtgcggatggcgcaggatttttccatgagattt
ccgctgatcgcagggcatggaaatttcggttcggtagacaacgatccaccagcggcaatg
cgatacacagaatgccgcttggaagctttaaccagcgatgctcttctgcaagatatcgaa
tcggaaacagtagatttcatcgataacttcgatgcttcccagcaagaacctacagtcttg
ccagcccgtatcccacagttgctgctgaatggttcctctgggattgcggtgggtatggca
accaacatccccccgcataacttgggtgaattgattgatgggttggtagcactgattgaa
aatccagaaataaccgacattcagttaatgcagtatatccccggacctgactttcctact
ggaagtcagattctagggacgacagcaattaaagaagcttataccaccgggcgcggttcc
atcaccatgcgcggcgtggctacaattgaaactattgaacaacggggacgccctgacaga
gacgcaattatcatcaccgaattgccttaccaaaccaacaaggcggcgttgattgaaaaa
attgccgagatggtgaacgaaaaaaggctcgagggaattgccgatattcgggatgaaagc
gatcgcgatgggatgcgagttgttatcgaacttaagcgcgatgcttatccccgtgtcgtc
ctcaacaacctctacaagcaaacaccgttgcaagcaaactttggggcgaatatgctggcg
ctggtgaatggcgaaccgcagatactcaccctgaaggagtttttgcaagtctttttggat
ttccgcatcgaagcgattaccagacgcacccgttacgaactgcggaaagccgaagaacgc
gatcacatactgcaagggttattaattgccctgctgcatttagatgaaattattagctta
attcgcaatgcatctgatgcaccgacggcaaaaggggagttgatcacaacctacgggctt
tcggaagcgcaagcagatgcgatattgcaaatgcaactgcggcgtttaacagcgctagaa
gcagacaaaatccgctccgaacacgaagaattacaagcaatcattgctaacttgcaggat
atcttggcacggcgagagcggattttagaaatcattcaaaacgaagtcacgcaactcaaa
cagaaacacgccacaccgcgccgcacggttatttcaccccttgaaggagaaattgatgag
cgtgatctgattgccaatgaaaaagctctgattctgctgactgagcaaggttacatcaaa
cgaatgccagtcagtacctttgaagcgcaaagccgtgcaactagaggtaaagcagctgcc
aaaatcaaagaagatgataacgttgagcatttcttgacttgctgcgaccatgacagcatt
ctattttttagcgaacgaggtgttgtttactgcctgaaagcgtatcaaatccctgttggt
tctcgtaccagtcgcggcacaccaattgtgcaaatgctacccattcccaaagaagagaaa
atcacctcgattgtccctgttgacgagtttagcagcgatgaatatttggtcatgcttacc
aagggcggcaatatcaagaaaaccgagttagcagcgtttagcaatattcgtgctaacggc
ttgattgccatatccttagaagaaggcgaccaactccggtgggtacgacgcgccagagta
gaagacagcgtaatcattggttcgcgtcaggggatggcaattcactttagatgcacccac
gaacaactgcgtcccctgggaagggcaactcgtggagtaaaatcgatgaaattgcgtaag
ggtgatgaactagtgggaatggatattctgcccgctgccattcttgccactttagataca
gacacagaagccgaaatcgaggaaatcgaaacagaagaaattgaaaatgaagaatccaca
gaagtcccaggcaacggcagtactggtccttgggctttggtgattacaatgggaggatac
ggcaaacgcgtcccagttgcccagttccgcctgcaaaatcgcgccggtcaaggtctaacg
gcaaccaaattcaaaaatcgcaaaatcaaagaccaactagcaactctgcacattgtcaac
agtgacgatgaaattatgatggttaccagtcgcggtatcatcattcgtcaggcagtgaat
gcgatatcagtccaatcgcgatcagcaactggggtgcgagtgcagcgcctagacgaagat
gatgtgattacgggagtggcgatcgttccccccgatactggtgatgcagcagaggcagag
taa
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