Scytonema sp. HK-05: SAMD_02240
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Entry
SAMD_02240 CDS
T09974
Name
(GenBank) glycosyl transferase family protein
KO
K12990
rhamnosyltransferase [EC:2.4.1.-]
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SAMD_02240
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
scyt01005
]
SAMD_02240
Lipopolysaccharide biosynthesis proteins [BR:
scyt01005
]
O-antigen repeat unit
SAMD_02240
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
Glyco_tranf_2_3
Glyco_trans_2_3
Motif
Other DBs
NCBI-ProteinID:
BAY42646
LinkDB
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Position
complement(260646..261563)
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AA seq
305 aa
AA seq
DB search
MSKNRVAAYITAYKDYAAVNQCIQAIRQQTYKVSAIFVLDNSPVSLLDNTDSSIIVSHHP
TNIGIGEGLRIAIQWAISQGYDFLWTFDQDSVPTANCLDTLLETYEKLSGDNYKIGIIAP
TPIDKRTNEVVEGAVYNCDRFIAYKHNSKVGFYECDAPITSGSLISLSVAKNISLPRGDL
FIDGIDLDYGLRLRQQGFKNLIVPSAIMYHNFGQPIKVKFLNKEIFVHKYSALRHYYICR
NHTYLSTRYAKGWYKLTSCLRRLKFLIRTLAFILMYDSEERVIKIWACLLGTFYGLKGKL
GKTWQ
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaagaacagagtagcagcttacatcactgcttacaaagattatgcagctgttaat
cagtgtattcaggcaattcgtcaacaaacttacaaggttagtgctatctttgttttagac
aattcgcctgtttcactactagataatactgacagttcaatcatagtaagccatcaccca
actaatattggtattggcgagggtttgaggatagcaatacagtgggcgattagccaaggg
tacgactttttgtggacatttgatcaagatagcgtacccactgctaactgtcttgatact
ctcttggaaacatacgaaaaactgtctggcgataattataaaattgggattatcgctcct
actcctatagataaaagaactaatgaagttgtagagggtgcagtctataattgcgatcgc
tttatcgcttataagcataacagcaaagttggtttctatgagtgtgatgcacctatcacc
tctggttctctaatttctctgagtgtagcaaaaaatatttcgcttcctagaggagactta
ttcattgatggcattgaccttgattatggattgcgtcttagacaacaaggttttaaaaat
ctaattgtccctagtgcaattatgtaccataacttcggtcagcctattaaagtcaaattt
ctgaataaagaaatttttgtacacaaatactctgctcttcgccactactacatttgccga
aatcacacatatctatccacacgctacgcaaaaggatggtacaaactcacaagctgtctg
cggcgcttaaaatttctcatccgtaccctagcttttatcttgatgtatgattctgaagaa
agggtgataaaaatctgggcatgcttattaggaacgttttatggtttaaaaggcaagctt
ggtaaaacttggcagtga
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