Scytonema sp. HK-05: SAMD_04650
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Entry
SAMD_04650 CDS
T09974
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt03030
DNA replication
scyt03430
Mismatch repair
scyt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAMD_04650
03430 Mismatch repair
SAMD_04650
03440 Homologous recombination
SAMD_04650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scyt03032
]
SAMD_04650
03400 DNA repair and recombination proteins [BR:
scyt03400
]
SAMD_04650
Enzymes [BR:
scyt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAMD_04650
DNA replication proteins [BR:
scyt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAMD_04650
DNA repair and recombination proteins [BR:
scyt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAMD_04650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HHH_6
tRNA_anti-codon
Intein_splicing
Motif
Other DBs
NCBI-ProteinID:
BAY42887
LinkDB
All DBs
Position
complement(550802..552148)
Genome browser
AA seq
448 aa
AA seq
DB search
MVKILTRKLVETQNVYDIGVERDHNFVTKNGFIASNCFNKSHSTAYGYVTYQTAYLKANY
PLEYMAALLTANSDDTDKVQKYISTCMSMNIQIEPPDINRSLVDFTPSNGKILFGLSAVR
NVGQNAIACILEVRDKGEFKSLGDFCDRVDLGTVNRRTLESLIYCGAFDKIDSNRNQLIQ
DLGLVYDWAQSRARDRATGQGNLFDLLGGGFSHNKNKVQNSFESAPKAQPVPDFPPQEKL
RREKELLGFYVSDHPLKAIRQSARVLAPINLSQLGEQKEESTICAVVMLNGVKKVMTKKG
DPMAILQIEDLTAQSEAVVFPKIYERINSLLLVDSRLIIWGKIDRREDQTQLIVEDVEPV
ETVHLVMVELNLQQAATIEEQHRLRTILQEQSGDKEKAKVPVIGIVQAGNSRQLVRFGRQ
FWVQDSRTTVQALQNARFSAHVQSLTNV
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaattttaacacgaaaattagtagagacgcaaaatgtctatgatattggggta
gagcgggatcataattttgttactaaaaatggcttcatagcttccaattgtttcaataaa
tcccattctacggcatatggttatgtaacatatcaaaccgcgtacttaaaagctaactat
ccattggaatacatggcggcgctgttgacggctaacagtgacgacacagacaaggtgcag
aaatatatttccacctgtatgagtatgaatattcagatagaaccgccagatatcaatcgc
tctcttgtggattttacaccgtcaaatggcaaaattttgtttggattgtccgctgttcgt
aacgtgggacagaacgcaatagcgtgtattttggaagtgagagacaaaggagagtttaaa
tccttgggtgatttttgcgatcgcgtggatttgggtactgttaaccgtcgcactttagaa
tcgctcatttactgtggagcctttgataaaatcgactccaaccgcaaccaacttatccag
gacctaggtttagtgtatgattgggcacaatcgcgtgccagagatagagcgactggacag
ggaaatctttttgatttgttaggtggcggattttctcataataaaaacaaagtccaaaat
agctttgaatctgctcccaaagctcaaccagttcctgattttcctccacaggaaaagttg
cggagagaaaaagaacttttgggattttatgtatcagatcatcctctgaaagctattcgc
caatcagcccgtgttctagctccgattaacctttcgcaacttggcgaacagaaagaggaa
agtaccatttgtgcggttgtcatgctcaatggcgttaaaaaagtgatgaccaaaaaaggc
gacccaatggcgattttgcaaatagaagatttaactgcacaatcagaagcggtggtattt
cccaaaatttatgagcgaattaattcactgcttctggttgattctaggttaattatttgg
ggcaaaatagaccgacgcgaagaccaaactcaattgattgttgaagatgtagaaccagtg
gaaacagtacatctggtgatggtggaactcaacctccaacaagccgctactattgaggaa
cagcatcgcctcagaacaattttgcaagaacaatcaggagacaaagaaaaagcaaaagtg
ccagtgataggaattgtacaagccggaaattcccgtcaacttgtccgttttggacgacaa
ttttgggtacaggattcgagaacaactgttcaggctcttcaaaacgccagattttctgct
catgtacaatcgctgactaatgtttga
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