Scytonema sp. HK-05: SAMD_05250
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Entry
SAMD_05250 CDS
T09974
Name
(GenBank) cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt02010
ABC transporters
scyt03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SAMD_05250
03070 Bacterial secretion system
SAMD_05250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyt02000
]
SAMD_05250
02044 Secretion system [BR:
scyt02044
]
SAMD_05250
Transporters [BR:
scyt02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SAMD_05250
Secretion system [BR:
scyt02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
SAMD_05250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Peptidase_C39
AAA_22
NB-ARC
AAA_16
AAA_29
RsgA_GTPase
DUF87
RecA_C
AAA_30
NACHT
ABC_ATPase
Zeta_toxin
nSTAND3
MobB
Motif
Other DBs
NCBI-ProteinID:
BAY42947
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Position
628993..630849
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AA seq
618 aa
AA seq
DB search
MIVADPAIGQRTLTYAEFKAGWTGYALLVQPTAELKESQEANTPFWQLWELVKPHGQVLL
EVFITSVFIQVFGLVTPLFTQLLLDRVIVQGSTLTLTAIGLGLLIFGLFRVAMNGLRQYL
LDHTANRIGTALMVGFIKHTFRLPLAFFESRYVGDIVSRVQENQKIQRFLTGEALSIILD
LLTVFIYVGLMFWYSWQMALLVLLIVPPFFILALVATPLFRRINREVFNAGSNENSYLIQ
ALTGIRSIRSMAIEQTVRWHWEELLNNLIKKMFGAQVIANQLQVFSSTIESVANTGLLWF
GAWLVIHNQLTIGQLVAFNMLLGNIIHPFQRLTVLWNQLQEVMVSTERINDVLEAEPEED
LQHQPRQSLPRLRGYIRFRDVTFRYHPESDINVLENLSFEIQPEQTVAVVGRSGSGKTTL
SKLILGLYTPTNGKVLIDGHDVTSLQMRSLRQQIGVVDQETFLFGGTIRENISIAHPEAT
LEEITQAANLAGASEFIQQLPMGYETQIGEGGGMLSGGQRQRLAIARALLGNPRLLIFDE
ATSHLDAESERIIQNNLKTILQGRTSLIIAHRLSTIRNADLILVLDQGVLVESGTHKELI
AKKGHYYYLNQQQLAQVG
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
gtgattgtcgccgatcctgccatcggtcaacgcaccctcacttatgctgagtttaaagca
gggtggactggttatgccttattagtgcaaccgacagcagaactcaaagaaagccaagaa
gcgaatacaccattctggcaattgtgggagttagtcaaaccacatgggcaagtcctgctg
gaagtcttcatcacttcggtatttatccaggtgtttggactagtcacgcctctgttcacc
cagttactgttagacagggtgattgtccaaggtagtaccctcaccttaactgccattggg
ttagggttgctgatttttggtttgttccgcgtcgccatgaacggactacgacaatacctg
ctagatcatacagccaaccgcattggaacagcgctgatggtaggttttatcaaacatacc
ttccgccttcctctagccttttttgagtcgcgttacgtcggcgatattgtttctcgcgtt
caagaaaaccaaaaaattcagcgtttcctgactggcgaagcactgtcaatcattcttgat
ttactgacagtgtttatctatgtgggtttgatgttttggtatagctggcagatggcattg
ttagtgctgttgattgtaccgccattttttattctggcgctggttgccacacctttgttc
cgccgcatcaaccgtgaagtttttaatgccgggagcaacgagaacagttatttaattcaa
gccctgacaggaattcgctcgattcgctcaatggcaattgaacaaacggtgcgctggcat
tgggaagaactgctaaataatttgattaaaaaaatgtttggcgcacaagtcattgccaac
caactgcaagttttcagttctaccatcgaatcagtggcaaatacaggattactgtggttt
ggagcatggctggtgattcacaaccaactgacaattgggcaacttgtagccttcaatatg
ttgttgggtaatatcattcatcctttccaacgcttgacagtactgtggaatcaattacaa
gaggtgatggtttccaccgaacggattaatgatgttctagaagcggaaccagaagaagac
ttacaacatcaaccacgccaatctttgccaagactgcggggttacattcgctttcgggat
gtgactttccgctatcacccagaaagtgatatcaacgtactggaaaacctcagttttgaa
attcagcctgagcaaactgtagcggttgtagggcgtagcggttccgggaaaacaaccctt
tccaagctgattttaggtttatataccccgacaaatggcaaagtattgattgatggtcat
gatgtgacgagtcttcagatgcgatcgctacgacaacaaattggtgttgtcgatcaagaa
acctttttgttcggcggtacgattcgggaaaacattagcatcgctcacccagaagccact
ttagaagagattacccaagcggcgaatctagcaggggcttcggaatttattcagcaatta
cctatgggttacgaaacccaaatcggtgaaggcggcggaatgctctctggtggacaacgt
caacgtctagcaattgctcgtgctttactaggtaatccccggttgttaattttcgacgaa
gcaaccagtcacctcgatgcagaatcagaacgcatcattcaaaacaatttgaaaacaatt
ctccaaggacgtaccagcttgattattgcccatcgactttctaccattcgcaatgctgac
ttgattctggtattagatcaaggtgtgttggtggaaagcgggactcacaaggaattaatc
gccaaaaaaggtcattactactacctcaatcaacaacaacttgctcaagtaggttga
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