Scytonema sp. HK-05: SAMD_06100
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Entry
SAMD_06100 CDS
T09974
Symbol
ispA
Name
(GenBank) polyprenyl synthetase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt00900
Terpenoid backbone biosynthesis
scyt01100
Metabolic pathways
scyt01110
Biosynthesis of secondary metabolites
Module
scyt_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SAMD_06100 (ispA)
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
SAMD_06100 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
scyt01006
]
SAMD_06100 (ispA)
Enzymes [BR:
scyt01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
SAMD_06100 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
SAMD_06100 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
SAMD_06100 (ispA)
Prenyltransferases [BR:
scyt01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
SAMD_06100 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
PhageMin_Tail
BetaGal_ABD_1
Motif
Other DBs
NCBI-ProteinID:
BAY43032
LinkDB
All DBs
Position
complement(729697..730689)
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AA seq
330 aa
AA seq
DB search
MLDLDSMESCRERVNFLLTNYYDQENPLYQPLNLALFYSRRRLRATLAYWGSGIVRGRPE
DADNIAMLYEIITANYVLIDDSVILDAGKERAGLPTPRIQYGEAAALLSACIIQLEPIRL
LPSDNLLLKEIFYQSARDTIIGLFLEQKLADLSPDSIVDEKEILRIARLMTGPLLAGAIT
SGAIMSGATQAQIDALNAYAMDFGTAYQIADHIVDLMVTAENSGKDNFSDITTNKKTIVV
NHALQHLPKDSWQWSEIINAIGTVPSAEKKSELQRIFKNSGSIQHCLNLVVALYSQAISH
LQELPDNQYRSLCMKLPDIYLKELLNSIDG
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgctagatttagactcaatggaatcttgccgtgaacgtgtaaattttctattaacgaat
tactacgatcaagaaaatcctctctatcagccacttaacctcgcattgttttatagtagg
cgtaggttgcgagcaactttagcgtattggggaagtgggattgtccgtggaagacctgaa
gacgctgacaacatagcaatgctttatgaaatcatcactgcaaattatgttcttatagat
gatagcgtgatcttagatgcgggaaaagagcgtgcgggtcttccaacaccaagaatccag
tacggagaggctgccgcacttttgtccgcatgtattattcagctggaaccaattcggttg
cttccatcagataacctactactcaaggagattttctaccaatcggctcgcgacacaatt
ataggcttattcctggagcaaaagcttgccgatttatctccagattcaattgtagatgaa
aaagaaattctgcgtattgcgcggctgatgacaggaccacttttggcaggtgcaataacc
tcaggtgcaataatgagtggcgctacgcaagcccaaattgatgctctaaatgcctatgct
atggattttggtactgcttatcaaatagctgatcatattgttgatctcatggtaacggct
gaaaattcgggcaaagataatttctccgatatcacaacaaacaagaaaactattgttgtt
aaccatgcactacagcatttaccaaaagactcatggcaatggagtgaaattattaatgct
ataggaactgttccctctgctgagaaaaaaagtgaactacagcgtattttcaagaatagc
ggctcgattcagcactgtctcaatcttgtagtagcgctatactcccaagccatatcacac
ctacaggaacttccagacaaccaataccgctccttatgcatgaaactccctgatatatat
ctcaaggagttactcaactcaatagatggctga
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