Scytonema sp. HK-05: SAMD_06290
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Entry
SAMD_06290 CDS
T09974
Name
(GenBank) phytoene dehydrogenase-related protein
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt00906
Carotenoid biosynthesis
scyt01100
Metabolic pathways
scyt01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
SAMD_06290
Enzymes [BR:
scyt01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
SAMD_06290
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
HI0933_like
Thi4
Pyr_redox_2
FAD_binding_3
GIDA
GDI
Pyr_redox
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
BAY43051
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Position
complement(757718..759211)
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AA seq
497 aa
AA seq
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MQDTDVIVIGSGIGGLVTATQLAAKGAKVLVLERYLIPGGSAGYFERQGYRFDVGASMIF
GFGQNGTTNLLTRALQAVNVSLDVIPDPVQIHYHLPNGLDLKVERVYEKFLQNLTAYFPN
QSQGIRRFYDECWRVFHCLNSMDLLSLEEPRYLMRVFFQHPLACLGLVKYLPQNAGDVAR
RYIQDPQLLKFIDMECYCWSVVPADMTPMINAGMVFSDRHYGGVNYPKGGVGQIAQKLVE
GLVKAGGQIKYQARVTKIILENRSSVGVQLANGQIYRAKRIVSNATRWDTFGKLLSQQKI
PFAEKKWQLRYHKSPSFLSLHMGVKAEVLPQGTECHHIVLEDWEKMTAPEGTLFVSIPTL
LDPDLAPSGYHIIHAFTPEWIDDWQGLSGREYEEKKQEAARRIVDRLEKIFPGLNAGLDY
LEVGTPRTHRRFLGREDGTYGPIPRHKLRGLLGMPFNRTAIPGLYCVGDSTFPGQGLNAV
AFSGFACAHRIAVDLGL
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatactgatgtcatcgtcattggatctggtattggcggcttggtaacagcgact
cagttagccgcaaaaggtgctaaagtacttgtcttggaacgttatctgattccagggggc
agcgcaggttactttgaacggcaaggctatcgcttcgatgttggggcgtcgatgattttt
ggctttggtcagaacggtaccaccaacttactcactcgtgctttgcaagccgtcaacgta
agcttagatgtgattcccgatccagtgcagattcattatcatctgcccaacggcttagac
ctaaaagttgagcgagtatatgaaaaatttttgcaaaatctaactgcctatttccccaat
caaagccaagggattcgtcgcttttatgacgagtgttggagagtatttcattgtctcaac
agcatggacttgctctcgcttgaagaaccccgatatttaatgcgtgtattttttcagcat
cctttagcgtgtcttggtttagtgaagtatctgccccaaaatgccggagatgtggcgcgg
cgctatattcaagacccccagttgttgaaatttattgatatggagtgttattgctggtcg
gtggtaccagctgacatgacgccaatgattaatgctggaatggtattttccgacaggcac
tatggaggagtcaactatcctaaaggtggtgtgggacaaatagcccaaaaattggtagag
gggcttgtcaaagcaggtggtcagatcaagtaccaagctcgggtgacgaaaattatccta
gaaaataggagctccgtaggtgtacaactggctaatggtcaaatctaccgtgccaaacgc
attgtttccaatgctacacgctgggatacatttgggaaattacttagtcaacaaaaaatt
ccttttgctgagaaaaagtggcagctacgctatcacaagtcgcccagttttctgagtttg
cacatgggagtgaaggcagaagttttgccccaaggaacggaatgccatcacattgtgcta
gaagattgggagaagatgacagccccagaagggactttattcgtgtctatcccgacgttg
cttgatccagatttagcgcctagcgggtaccatattattcacgccttcacacctgagtgg
atcgatgattggcaaggactctctgggcgggagtacgaggaaaagaaacaagaggcggct
aggcgaattgttgaccgattggaaaagatttttcctggtttaaatgcagggttggattat
ctggaggtgggaacaccacgaacccatcgccgctttttaggtcgtgaagatggtacttac
ggaccaattccccgtcacaaattgcgggggttgttggggatgccgtttaacagaacggca
attccagggctttattgtgtgggagatagtacatttccaggtcaggggttgaatgcggtg
gcgttttccgggtttgcttgcgcccaccgcattgccgtggatttggggttgtag
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