Scytonema sp. HK-05: SAMD_07290
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Entry
SAMD_07290 CDS
T09974
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
scyt
Scytonema sp. HK-05
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scyt03009
]
SAMD_07290
Enzymes [BR:
scyt01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
SAMD_07290
Ribosome biogenesis [BR:
scyt03009
]
Prokaryotic type
ribosomal protein modification factors
SAMD_07290
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Mur_ligase_C
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
BAY43150
LinkDB
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Position
882754..884073
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AA seq
439 aa
AA seq
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MGDKPTISISHLGCEKNRVDTEHMLGLLVEAGYSVDSDEQLADYVIVNTCSFIEAARQES
VRTLVELAEADKKIVITGCMAQHFQEQLLEELPEAVAVVGTGDYHKIVDVIQQVEQGKRV
KIVSSQPTYIADETTPRYRTTTEGVAYLRVAEGCDYRCAFCIIPHLRGNQRSRTIESIVT
EAEQLASQGVQEIILISQITTNYGIDIYGKPKLAELLRALGKVDVPWIRMHYAYPTGLTP
DVIAVIQETPNVLPYLDLPLQHSHPDILRGMNRPWQGRVNDAIIERIKDALPNAVLRTTF
IVGFPGETQEHFEHLLQFVERHEFDHVGVFTFSAEEGTPAYNLPNQLPQFVMDERRNVLM
ELQQPISLKKNQQEVGKVVNVLIEQENPVTGELIGRSDRFSPEVDGQVLVHGEARLGTIV
PVAIQNADAYDLYGQVVNN
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacaagccaacaatttcaatttctcacctaggctgcgagaaaaatcgagttgac
acagaacatatgctaggactgctggtagaagcaggctacagcgtagattctgatgaacag
ttagcagattatgttatagtcaatacatgtagttttattgaagcagcaagacaagaatct
gtcagaaccttagtggaactggcagaggcagataaaaaaatcgttatcacaggctgtatg
gcgcagcacttccaagaacagttattggaagagctgccagaagccgtagccgtagtagga
accggggattatcacaaaatagtcgatgtcattcagcaggtagaacaaggcaagcgggtt
aagatcgtaagttcacaaccaacctacattgctgatgaaaccacaccccgttatcgcact
acgactgaaggcgtggcttacctgcgggttgctgaaggttgtgattaccgatgcgctttt
tgcataattccccacctgcggggaaaccagcgatcgcgtacaattgaatcaatagtgacc
gaagcagagcagttagcaagtcaaggggtacaggaaattattctaatttcccaaataacc
accaattacggtattgatatttacggcaagccgaagttagccgaattactccgtgcctta
gggaaagttgatgtgccgtggattcgcatgcactatgcgtatcccaccggactgacccca
gatgtgatagcggtcattcaagaaacaccgaacgtcttgccttacctggatttgccccta
caacattcccatccagatattctccggggtatgaatcgtccctggcaaggacgagtgaat
gatgcgattatcgaacgcatcaaagacgcgctaccaaacgctgtgctgcgaacgacattt
attgtcggttttccaggagagacacaggagcattttgagcatttgttacagtttgtcgag
cgtcatgaatttgaccacgtaggtgtcttcaccttttcagcagaagaaggaactcccgcc
tacaacctaccaaaccaactgccccaattcgtcatggatgagcggcggaacgtattgatg
gaactccaacagccaatttctttaaagaaaaatcaacaagaagttggcaaagtggtcaat
gttctgattgaacaagaaaatccggtaacaggagaattaattggtcgttctgacagattt
tccccagaagtcgatgggcaggtcttagttcatggggaagcacgattaggaacaatcgtg
ccagtagctatccaaaatgctgatgcttacgacctttatggtcaagttgtcaataattaa
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