Scytonema sp. HK-05: SAMD_11040
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Entry
SAMD_11040 CDS
T09974
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
scyt
Scytonema sp. HK-05
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scyt03016
]
SAMD_11040
Enzymes [BR:
scyt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SAMD_11040
Transfer RNA biogenesis [BR:
scyt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SAMD_11040
Prokaryotic type
SAMD_11040
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
BAY43524
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All DBs
Position
complement(1289824..1290711)
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AA seq
295 aa
AA seq
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MQGFLNLNKPFDWTSHDCVAKTRKLLRLKRVGHAGTLDPAATGVLPIAVGKATRLLQYLP
GEKAYKATIRLGVRTTTDDLEGEIIASQPCTKLSLDAVKSALEKFVGKIEQIPPIYSAIQ
VQGKRLYELARKGEDVEVPARIVEVFQIEILDWREKEFPEVDVAIACGAGTYIRAIARDL
GTVLQTGGTLAALTRTQSSGFDLTDSITLTDLEAKVQAGTFQPTPPDAALQHLPFITLSA
TQAQKWCQGQRICVTLNVVEILRVYDEDGRFLGIAKLVNSDTNQLLIPEMVFEPI
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtttcctcaatctcaataaaccatttgactggacttcccacgactgtgtggcg
aagacacgtaaacttttgcgcctcaagcgcgtgggacacgctggaactttagatccagca
gccacaggagtgttacccatcgccgttggtaaagcaactcgcttgttgcagtatcttccc
ggagaaaaagcttacaaagcgacaattcgcttgggtgtgcgtaccacaaccgatgatttg
gaaggcgaaatcatcgcctcgcaaccttgcactaagttgagtttagacgcggtgaaatca
gcactggaaaaatttgttggcaaaatcgagcaaattccaccgatttacagcgccattcaa
gtccaaggcaaacgcctgtacgagttagcacgtaaaggggaagatgtagaagtgccagca
cggatagtggaagttttccaaattgaaattttggactggcgagaaaaggagtttccggaa
gtggatgtggcgatcgcctgtggtgcggggacatatattcgggcgatcgcccgtgattta
gggacagtcttacaaactggtggaactctcgctgctttaacacgaacacaaagcagtggg
tttgacttaacagatagcatcaccttgaccgacttggaagcgaaggtgcaagctgggaca
tttcaacccactccccccgatgcagccttacagcatcttccttttattaccttaagcgca
actcaagcacagaaatggtgtcaaggtcagcgcatttgtgttactctcaatgttgtagaa
atcttacgagtttacgatgaagatgggcgctttttgggaatcgctaaactggtaaattca
gatacaaaccagctactaattcctgaaatggtgttcgagcctatctaa
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