Scytonema sp. HK-05: SAMD_14050
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Entry
SAMD_14050 CDS
T09974
Name
(GenBank) RNA-binding S1 domain-containing protein
KO
K02945
small subunit ribosomal protein S1
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
SAMD_14050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
scyt03011
]
SAMD_14050
Ribosome [BR:
scyt03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
SAMD_14050
Bacteria
SAMD_14050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_2
DUF2110
Motif
Other DBs
NCBI-ProteinID:
BAY43818
LinkDB
All DBs
Position
complement(1632718..1633620)
Genome browser
AA seq
300 aa
AA seq
DB search
MDSEAQFSQKANSSFTMDDFAKALEKHDYQFQKGQVVNGRVFQLDPDGAYVDIGGKSSAF
VPRDEASLRTVTDLSEILPLNENLEFLIIRDQDAEGQVTLSRKQLEIQHIWDRLAQMQEN
SQTTQVRVINVNKGGVTVNVQGLRGFIPRSHLVERDNLEALKGQSLNAGFLEVNKSNNKL
ILSQRIATRSASFSTLEVNQLVLGKISGIKPFGVFVDLDGTSALLHIKQISQKFIENLEK
VFQVGQPIKAIIIDLDEGKGRVALSTRVLENFPGEMLENMDEVMASAEARAERAKNKVSE
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggattccgaagcgcaattttctcaaaaagccaattcgtcgtttacaatggacgacttt
gccaaagcactggaaaaacacgattaccagtttcaaaagggacaggtggtaaacggcaga
gtctttcaacttgatcctgatggagcatatgttgatattggtggcaagtcgtcggcgttt
gttcctcgcgatgaggcttctttgagaacagtaaccgatttgtccgagatactgccatta
aatgagaatttagaattcttaatcatcagggatcaggatgcagaaggtcaagtcaccctt
tcgcgaaagcaactggaaatccagcacatttgggatcgactggcgcaaatgcaggagaat
tctcaaacgacgcaagtgcgggtaataaatgtcaataaaggtggcgttaccgttaatgtt
cagggtttgcgaggatttattccgcgatcgcacttggttgagcgagataatttagaagca
cttaagggtcaatctctcaatgctggctttttggaggttaacaagagcaacaataagctt
atcctttcccagcgcatagcaactcgttctgctagcttcagtacattggaagtgaatcag
ctggtgcttgggaaaatcagtggtatcaaaccctttggtgtctttgtggatttagatggc
acaagcgccttgcttcatattaagcagataagccagaaatttattgaaaatctggaaaag
gtgtttcaagtcggtcagccgattaaagctataatcatagacttggatgaaggcaaaggt
cgggttgctctttccacgagagttttggaaaatttcccaggcgagatgctagaaaatatg
gacgaagtcatggcatccgccgaggcgcgtgcagaacgagcaaaaaacaaggtgtcggaa
tag
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