Scytonema sp. HK-05: SAMD_15540
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Entry
SAMD_15540 CDS
T09974
Name
(GenBank) MutS2 family protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SAMD_15540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scyt03400
]
SAMD_15540
DNA repair and recombination proteins [BR:
scyt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
SAMD_15540
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
DUF2239
Vip3A_N
MutS_III
kleA_kleC
Peptidase_S46
Motif
Other DBs
NCBI-ProteinID:
BAY43960
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Position
1802263..1804773
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AA seq
836 aa
AA seq
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MIQSETLELLEWSRLCQHLSTFAATKLGTIAARHLKIPALPPETEQLLAQTKEVYELENR
LGPGLSFDGIQDIGDSLERAELQGILTGDELLAIATTLAGTRNLRRVIDNHPDLTILNDL
VADLRTYPELEQEIHRCIDERGQVSDRASQKLGEIRTSVRQVRSQITQKLQNILQVKANA
VQEQIITQRSDRFVIPVKAPQKDAIPGIVHDTSTSGATLYVEPNSIVPLGNQLRQLVKRE
QAEEEAIRRTLTQQVGAVKPDLERLLAIVTTLDLALAKARYSFWLKANPPRFIHREQNES
ITLRQLRHPLLEWQHHHEQGSAVVPVDLLIAPHIRVVTITGPNTGGKTVTLKTLGLAVLM
AKVGLFVPAREPVELPWFDKVLADIGDEQSLQQNLSTFSGHIRRISRILAAIDEVGDEAD
EADEADEADEADEADEELTGVISSSSSSSLPSSLILLDEVGAGTDPAEGSALAISLLQYL
ANHALLTIATTHFGELKALKYEDERFENASVEFDESTLSPTYRLLWGIPGRSNALTIARR
LGLKPEVVEQAKTQLGGATDEVNQVIAGLEAQRRSQETKAAQAQDLLQQAERLYKEVSAK
ATGLEERERALRASQEVAVQQAITQAKGEIAQVIRRLQQGQPTAQDAQQATNALNKVAEK
FIPVKPPKPKVGFVPKVGDRIRIPKLGQTAEVLTAPDSDGELTVRFGIMKMTVKVQDVES
LDGQKAEPVVKEPKNRGAEEARSRGESKITTLTETPAIRTSKNTVDLRGRRVSDAEITLD
KAISEATGPIWIIHGHGTGKLRQGVHAFLQHHPRVSRYEAAEQADGGTGVTVAYVE
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
ttgatccaatctgaaactttagaactacttgaatggtctcgcctctgccagcatttgtcc
acctttgcggcaaccaagctggggactattgctgcacgccatctaaaaattcctgcgttg
ccacccgaaactgagcagttgttagcgcaaacaaaggaagtctatgaactggaaaaccgc
ctaggtccagggctgtcgtttgacggaattcaagatattggtgattctttagaacgcgca
gaactgcaagggattttgacaggagatgaactgttggcgatcgccaccactctcgctggc
acaagaaacctacgccgtgtgatcgacaaccacccagatttgacgatattgaatgatttg
gttgccgatttacggacttatccagaattagagcaagaaattcacagatgtatagatgaa
agagggcaggtgagcgatcgcgccagccaaaaactcggtgaaattcgcacttctgttcgg
caagtacgcagtcaaatcacccaaaaactgcaaaatattttacaggtaaaagcgaatgca
gttcaagaacaaataattacacaaagaagcgatcgctttgtaattcccgtgaaagcgccc
caaaaagacgctataccgggcattgtccatgatacttccaccagcggcgcaacgttgtac
gtggaaccgaattccatagttcctttgggaaaccaattgcggcagttggtaaaaagagag
caagcagaagaagaagcgattcgccgtactttaactcagcaagtgggtgctgtcaaaccg
gatttggaaaggttgttagcaattgtcacaaccttggatttggcattggcaaaagcacgt
tatagtttctggcttaaagcaaatcccccacgctttattcaccgcgagcaaaacgaaagc
attacgttacggcagttgcgtcatccgcttttggagtggcagcatcaccatgaacaagga
tctgcagtggttcccgttgatttgctcatcgcgccgcacattcgggtagttacgattacc
ggtccaaacactggtggtaaaactgtaactttgaaaactctgggtttggcagtattgatg
gcgaaagtaggcttatttgtgcctgctcgtgaacctgtagaattgccttggtttgacaag
gtgctggcagatataggcgatgaacagtcgctacagcaaaacttatccaccttttctggt
cacattcggcgcattagtcggattttggcagcgatagacgaagtaggagatgaggcagat
gaggcagatgaggcagatgaggcagatgaggcagatgaggcagatgaggaactaacagga
gtcatatcctcctcatcctcttcatccctcccctcgtctttaatcctgctcgacgaagtg
ggcgcaggaacagatcctgctgaaggaagtgctttggcaatatcgctactacaatattta
gcaaaccatgctctgttgacaattgcgaccactcactttggtgaactaaaagcactgaaa
tatgaagatgagcggtttgaaaatgcctctgtagaatttgatgaaagtaccctttcaccc
acttaccgtctactatggggaattcctggacgttccaacgctctgacaattgcccgtcgc
ttgggtttgaaaccagaagttgtggaacaggcgaaaacgcaactgggaggagcgacagac
gaagttaatcaggtgattgctgggttggaagcacaacgccgcagtcaagaaaccaaagca
gcacaagcacaagatttgttgcagcaagctgagcgtttatacaaagaagtatccgcaaaa
gccacaggattagaggaaagagaacgtgctttgcgtgcctcgcaagaggtggcagtgcag
caggcaattacccaagcaaaaggtgagatagctcaagtgattcgccgcttgcagcaaggt
cagccaacagcacaagatgcccaacaagcaacaaatgctttgaataaagtagctgagaaa
tttataccagtaaagccaccaaaaccgaaagtgggatttgttcccaaagtgggcgatcgc
atccgtatacccaagctagggcaaacagcggaagtcttaactgctcctgattcagatggt
gagttaacagtccgctttgggattatgaaaatgacggtgaaggtacaagacgtagaatct
ttagatggtcaaaaagctgaaccagtcgttaaggaacccaagaatagaggagcagaggag
gctaggagcagaggagagtcaaaaatcacaaccttgacagaaactcctgcaattcgcaca
tctaaaaatacggtagatttgcgtgggcgtagggtgtctgatgccgaaataactttggac
aaggcaatttcagaagcaacaggaccaatatggattattcacggacatggcacgggtaag
ctgcggcaaggagttcacgccttcttgcagcaccacccgagagtcagccgttatgaagca
gccgaacaagccgatggcggtactggtgtgacggttgcttatgttgaatag
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