Scytonema sp. HK-05: SAMD_15760
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Entry
SAMD_15760 CDS
T09974
Name
(GenBank) chaperone protein DnaK
KO
K04043
molecular chaperone DnaK
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAMD_15760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scyt03019
]
SAMD_15760
03110 Chaperones and folding catalysts [BR:
scyt03110
]
SAMD_15760
03029 Mitochondrial biogenesis [BR:
scyt03029
]
SAMD_15760
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scyt04147
]
SAMD_15760
Messenger RNA biogenesis [BR:
scyt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SAMD_15760
Chaperones and folding catalysts [BR:
scyt03110
]
Heat shock proteins
HSP70 / DNAK
SAMD_15760
Mitochondrial biogenesis [BR:
scyt03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
SAMD_15760
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
SAMD_15760
Exosome [BR:
scyt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SAMD_15760
Exosomal proteins of breast cancer cells
SAMD_15760
Exosomal proteins of colorectal cancer cells
SAMD_15760
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Motif
Other DBs
NCBI-ProteinID:
BAY43982
LinkDB
All DBs
Position
1827094..1829049
Genome browser
AA seq
651 aa
AA seq
DB search
MGKVIGIDLGTTNSCVAVLEGGQPIVIANSEGGRTTPSIVGFAKGSERLIGQLAKRQAVT
NAENTIFSIKRFIGRRWDDTAVERDRVPYTCVKGRDDTVDVEIRGHHYTPQEISAMILQK
LKQDGENFLGEPVTQVVITVPAYFTDGQRQATKDAGTIAGLEVLRIINEPTAAALAFGLD
KLEQEQLVLVFDLGGGTFDVSILQLGDGVFEVKATGGNNHLGGDDFDNCIVRWMMERFQQ
EQKVDLSQDKMALQRLREAAEKAKIELSSMLSTSINLPFITADETGPKHLEMELSRAKFE
ELTAHLVEATIEPMTQALKDAELKPQDIDRIILVGGSTRIPAVQNALIKFFNGKTPDRSV
SPDEAVALGAAIQAGVLGGEVDNLLLLDVTPLSLGIETLGEVFTKIIERNTTIPTSKSQV
FSTAVDGQNSVEIHVLQGERAMARDNKSLGKFLLAGIPPTPRGVPQIEVSFEIDVNGILK
VSAQDKGTLREQSIRITNTGGLSANEVERMRQQAEMFAEQDKRRIQLVELKNQTDNLLYS
YESTLKNNGNLISDEMRALANEKMALLQAAMTDETISLAEFKQRLDDFQQSLFAIGSQVY
NRVNRHDQMTEALDTLLTSEAAAPVNGTLTPQFNFDFDDENTTQVDYEVID
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagttattgggatcgacttaggcactaccaacagttgtgtcgcggttctcgaa
ggtggtcaaccaattgtcattgctaattcagaaggcggacgaacgacacctagtattgtg
ggatttgctaaaggcagtgaacgcttaatcggtcaactggcaaagcgtcaagctgtcacc
aacgccgaaaacacaattttcagcatcaagcgatttatcggtcgtcgctgggatgacacc
gcagttgaacgcgatcgtgtaccttacacctgtgtcaaaggtcgagacgatactgttgat
gtcgagattcgtggacatcactacacaccacaagaaatctccgccatgatcctacaaaaa
ctaaaacaggatggggaaaacttcttgggtgaacctgtgactcaggtagtgatcacagta
ccagcatattttacagatggtcaaagacaagcaactaaagacgctggcactattgccgga
ctagaagttttaaggattatcaatgaaccaactgcagcggctttagcgtttgggttggac
aagcttgagcaagagcagctcgttctggtatttgacttgggaggcggtactttcgatgtc
tccatcctacaacttggagatggagtgtttgaagttaaggcgactggtggtaacaaccac
ctgggtggggacgattttgataactgtatcgtacgctggatgatggaacgtttccagcag
gaacagaaagttgacctgtctcaggacaaaatggctttgcaacgcttacgggaagcagcg
gaaaaagcaaaaattgaactttccagtatgctcagtacttcaattaacttgcctttcatt
accgctgatgaaaccggtcccaagcatctggagatggaactcagccgcgccaaatttgaa
gagttaacggcacatctggtggaagccaccattgaaccgatgactcaagcgctgaaagac
gcggaactcaaaccacaagatatcgaccggattattttggtgggcggttccactcgcatt
cctgcggtgcaaaatgccttgatcaaattttttaatggcaaaactccagatcgctctgtc
agccccgacgaagcagtggcactaggcgcagctatccaagctggggtgctgggtggtgaa
gttgataatttgcttttgttagatgtcacgcccttgtctttaggtattgaaactttggga
gaagtgttcaccaaaattatcgaacgtaacaccacaattccaaccagtaagtcccaagtc
ttttccacagcagtcgatgggcaaaactcagtggaaattcacgtccttcaaggtgaacgg
gcaatggcacgagacaacaagagtttgggtaaatttcttctggcgggaattccgccgact
cctcgtggtgtaccgcaaattgaagtctcttttgaaattgatgtcaatggcattctcaaa
gtttcagcacaagacaaaggcactcttcgagaacaaagtattcggattaccaatacaggt
ggcttgagtgccaacgaagtcgaaagaatgcggcaacaagccgaaatgtttgccgaacaa
gacaaaagacgcatacaactggttgaactcaaaaaccagacggataatctgttatacagt
tacgaatcgacattaaagaacaatggcaacttgattagcgacgagatgagagctttggca
aatgaaaaaatggcactgctacaagcagcaatgaccgatgaaactatttccctagcagaa
tttaagcaacgcttagatgacttccagcaaagtttgtttgccattggctcccaggtgtat
aaccgcgttaataggcacgatcaaatgactgaagctttagatactttattgacctcagaa
gcagccgcgccagtgaatggaacgctaacaccacaatttaactttgattttgatgacgaa
aataccacgcaggttgattatgaagtgatagactaa
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