Scytonema sp. HK-05: SAMD_15790
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Entry
SAMD_15790 CDS
T09974
Name
(GenBank) ribosome small subunit-dependent GTPase A
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt00730
Thiamine metabolism
scyt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SAMD_15790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scyt03009
]
SAMD_15790
Enzymes [BR:
scyt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
SAMD_15790
Ribosome biogenesis [BR:
scyt03009
]
Prokaryotic type
GTPases
SAMD_15790
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
MMR_HSR1_Xtn
nSTAND1
ABC_tran
AAA_16
cobW
RsgA_N
GTP_EFTU
AAA_29
ATPase_2
Adeno_IVa2
AAA_23
AAA_22
AAA_21
AAA
SMC_N
Motif
Other DBs
NCBI-ProteinID:
BAY43985
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All DBs
Position
1831195..1832304
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AA seq
369 aa
AA seq
DB search
MTGEGLETTDQLIGTVLAVQANFYRVQLDAGEQRSLGAEEIKPPNSPLRLILLCTRRSRL
KKIGQQVMVGDRVVVEEPDWAGGRGAIASVLPRQSQLDRPAIANVNQILLVFAVADPPLE
PYQLSRFLVKAESTDIDVILCLNKCDLISKEQQAEIYQQLGNWGYQPIFISVGQGINIDE
LADKLKDQITVIAGPSGVGKSSLINGLIPNANLRVGEISGKLARGRHTTRHVELFELPTG
GLLADTPGFNQPDLDSPPEELASYFPEARQRLAVGSCRFSDCFHRDEPECVVRGEWERYQ
HYLDFLREAIERQTHQNQQTDPESTLKVKSKGKGQTQYEPKLESKKYRRSSRRTQLQELQ
HLYQESEES
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgacaggggaaggactagaaactactgaccagttaataggcacggtcttagccgtgcaa
gctaatttttatcgagtacagctagatgcaggggagcagaggagcctgggagcagaggag
attaaacctccaaattcccccctgcgccttatcctgctgtgtacccgtagaagccgattg
aaaaaaatcgggcaacaagttatggtgggcgatcgcgtagtcgtggaagaaccagattgg
gctggcggacgaggagcgatcgcgtccgttttaccccgtcaaagtcaattggatcgtccg
gcgatcgccaacgtgaaccaaattctgttagtttttgccgtcgccgatccgcctttggaa
ccataccaactcagccgatttttggtaaaagctgagtctaccgatatagatgtaatctta
tgcctaaataagtgcgatttaatctcaaaagaacaacaggcagaaatttatcagcagttg
ggaaattggggctaccaaccaatatttattagtgttggtcaaggtataaatattgacgaa
ctagcagacaagctcaaagatcagattacggtgattgctggaccttccggggttggcaag
tccagcctcatcaatggactgattcccaatgctaacttacgagtcggagagatttctggc
aaactagcaaggggtcggcacactactcgtcacgtagaattatttgaattgcctaccggg
ggtttactcgcagatactccgggatttaaccaacctgaccttgattctcctccagaagaa
ttagcaagttattttccagaagcaaggcagagattagcggttggtagctgtcgttttagt
gattgtttccaccgagacgaaccggagtgtgtcgttcggggagaatgggaacgatatcaa
cattacttagatttcttgagagaagcgattgagcgccagactcaccagaaccagcagaca
gatcctgaatccactctcaaagtgaaaagcaaaggtaagggacaaactcagtacgaaccg
aagctggaatctaaaaaatatcgtcgtagttcccgcaggacgcagttgcaggagttgcaa
cacttgtatcaagagagtgaagaatcatag
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