Scytonema sp. HK-05: SAMD_16060
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Entry
SAMD_16060 CDS
T09974
Name
(GenBank) extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
scyt
Scytonema sp. HK-05
Pathway
scyt02010
ABC transporters
scyt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
scyt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SAMD_16060
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SAMD_16060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyt02000
]
SAMD_16060
Transporters [BR:
scyt02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
SAMD_16060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
ABC_sub_bind
Peripla_BP_4
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
BAY44012
LinkDB
All DBs
Position
complement(1862242..1863489)
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AA seq
415 aa
AA seq
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MKQPAAITTAIFTTCAMLLTACGGGTNSSTNTGTNATPNSATNATATTSTSGAIPIGIAL
AQTSNVALLGQEGFVGAKIAEKYFNDQGGINGTPIRLVMQDTGGDEAGAINAFQTLINKD
KVVGIVGPTLSQQAFSADPIADRAKVPVLGASNTAKGIPEIGDYVARVSVPVSIVAPNSV
KAALKQNPNIKRVAVFYAQNDAFNKSETEIFQKTVKDQGLELVTVQKFQTTDTDFQAIAT
NALNLKPDLVIISGLAADGGNLVRQLRELGYKGIIVGGNGFNTPNIFSVCKALCDGVLIA
QAYSPEHPGEINETFHKIYVQQYKKEPAQFSAQSFTAVQVYVEALKALDKKTKISTMSID
KLRTELNKQLLAGKYNTPLGEISFTPVGDIVQKDFYVSQIKMDKDGNNGKFVFLK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaacctgctgctattacaactgcaatattcacgacttgcgctatgctgctaaca
gcctgtggcggcggcactaacagtagtacaaacactggaactaacgccaccccaaattct
gcaactaacgccacagcgacaacaagtacatctggtgctattcccattggtattgccttg
gcgcaaacgagcaacgtggcattacttggtcaagagggatttgttggagccaaaattgcc
gagaagtatttcaatgatcagggcggcatcaatggcactccaattcgattagttatgcaa
gatactggcggagatgaagccggagcaattaatgcttttcaaactttaattaacaaagat
aaagttgttggtattgttggtcctactttatcacagcaagcttttagtgccgacccgatt
gcagaccgtgctaaagttccagtgcttggagcatcaaatacggcaaaaggaattccggaa
ataggtgattatgttgcgcgtgtatcggtaccagtttctatcgtcgctcctaattcggta
aaagctgcgcttaagcagaatcctaatattaaaagagtggcagtattttacgctcaaaac
gatgcgtttaacaagtcagaaacagaaatatttcagaagacagttaaggaccaagggcta
gaattggtaacagttcaaaagttccaaaccactgacaccgactttcaagcgatcgccacc
aatgctcttaacttaaaacccgatttggtaatcatatctggtttggctgcggacggaggt
aacttagttagacaactgcgggaactgggttataaagggataattgtaggtggtaatggc
tttaacacaccaaatatcttctctgtgtgcaaagcgctttgtgatggcgtgttgattgct
caagcttacagtcctgaacatccaggagaaattaacgaaacatttcacaaaatctatgtt
cagcaatacaagaaagaacctgcccaattcagtgctcaatcttttacagcagtacaggta
tatgtagaagctctgaaagctttggataaaaagaccaaaattagtacaatgtccattgat
aaactgcggactgaattaaataagcaattactagcaggaaaatacaacactcctctgggt
gaaatctctttcacaccagtaggtgatatcgttcaaaaagatttttacgtctcccaaatt
aagatggataaagacggaaataatggcaagtttgtattcttaaaatag
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