Scytonema sp. HK-05: SAMD_16740
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Entry
SAMD_16740 CDS
T09974
Name
(GenBank) GAF sensor hybrid histidine kinase
Organism
scyt
Scytonema sp. HK-05
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HATPase_c
HisKA
GAF_2
GAF
OKR_DC_1_N
PDE8A_N
RNase_Y_N
V-SNARE_C
V_ATPase_I
SLATT_1
Motif
Other DBs
NCBI-ProteinID:
BAY44080
LinkDB
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Position
1941349..1948086
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AA seq
2245 aa
AA seq
DB search
MPTEQLTRETDNLDLRQLLKTLAAVKKGDFSARMPLDQTGMAGKIADTLNDIIEQNERLT
EELQRISNVVGKDGKISERASLGKVQGSWSDCVDSVNTLVTDLVQPTAETARVIRAVANG
DLSQTIAPEIEGRPLKGEFLQTAQMVNTMVGQLNSFASEVTRVAREVGTEGKLGVQAEVR
GVAGTWKDLTDNVNLMAGNLTAQVRNIAEVTTAVANGDLSKKITVNVNGEILELKNTINT
MVDQLNSFASEVTRVARGVGTEGKLGVQAEVSGVAGTWKDLTDSVNLMAGNLTAQLRNIA
EVTTAVANGDLSKKITVDVKGEILELKNTVNIMVDQLNSFASEVTRVAREVGADGKLGGQ
AEVRGVAGTWKDLTDSVNFMAGSLTAQVRNIAEVTTAVANGDLSKKITVDVKGEILELKN
TINTMVDQLNSFASEVTRVAREVGTEGKLGVQAEVRGVAGTWKDLTDNVNLMAGSLTAQV
RNIAEVTTAIANGDLSKKITVDVRGEIWELKNTVNIMVDQLNSFASEVTRVAREVGADGK
LGGQAEVRGVAGTWKDLTDSVNFMAGSLTAQVRNIAEVTTAVATGDLSKKITVDVKGEIL
ELKNTINTMVDQLNSFASEVTRVAREVGTEGKLGVQAEVRGVAGTWKDLTDNVNLMAGSL
TSQVRNIAEVTTAVANGDLSKKITVDVKGEILELKNTINTMVDQLSSFASEVTRVAREVG
SEGKLGVQADVKGVAGTWKDLTDSVNFMAGSLTAQVRNIADVTTAIANGDLSKKITVQVK
GEILELKNTINIMVDQLNSFASEVTRVAREVGSEGKLGVQADVRGVAGTWKDLTDSVNFM
AGSLTAQVRNIATVTTAVATGDLSKKITVDVKGEILELKNTINTMVDQLNSFASEVTRVA
REVGTEGKLGVQAEVRGVAGTWKDLTDSVNSMAGSLTAQVRNIAEVTTAVANGDLSKKIT
VDVKGEILELKNTINTMVDQLNSFASEVTRVAREVGTEGKLGVQAYVRGVAGTWKDLTDN
FNLMAGNLTAQLRNIAEVTKAVATGDLSKKITVDVKGEILELKNTINTMVDQLSSFASEV
TRVAREVGTEGKLGGQAQVQGVAGTWKDLTDNVNSMAGNLTAQVRGIAKVVTAVANGDLK
RKLMLDAKGEIETLAETINEMIDTLATFANQVTTVAREVGIEGKLGGQAKVPGAAGTWKD
LTDNVNELAATLTTQLRAIAEVATAVTKGDLTRSIAVEAEGEVAILKDNINQMIANLRET
TQKNTEQDWLKTNLAKFTRMLQGQRDLETVSKLILSELAPLVGASHGVFYIMDSAEETQY
LKLLSSYAYRERRHLANRFYLGEGLVGQSALEKERILLTEVPHDYIKISSGLGEFTPLNV
VVLPVLFEGQVTAVIELASFRRFSEIHLSFFDQLTESIAIVLNTIAASMRTEELLKQSQS
LAHELQSQQNELRETNKRLEQQAQSLKASEDLLKKQQEELQETNASLEERSELLALQNKE
VERKNQEIEKASRELEEKAEQLALSSRYKSEFLANMSHELRTPLNSLLILAKLLTDNVEK
NLTAKQVEYSRTIYSAGNDLLTLINDILDLAKIESGTMSIDVDQMLFTELQEHIERTFRQ
VAIDKGLNFTVDCAPNLPRSIHTDAKRLQQVLKNLLANAFKFTERGEVRLHIFVATQGWS
PDHATLSHAQTVIAFAVSDTGIGIAPEKQRIIFEAFQQADGTTSRKYGGTGLGLSISREI
TRLLGGEIKLTSRLGEGSTFTLYLPQSLHSDQEMGTWEDGQRISPQPSTRALRHKTPQPY
SALETRFALSAPQAYVNVDSSPASGEPPITTSPNSISPDQITSSLLDDRGNIQEGDRILL
IVEDDVNFARILLDMTRQQGFKGIVAHSGSTGLALAQQFQPSAIILDIRLPGMDGWAVLD
RLKHDPSTRHIPVHIMTVEEGRQRGLQLGAIAYIQKPVSSEALHQALTKIKGFVERRVKN
LLVVEDDENQRHSIVELIGNTDVATTAVRTGAEALEAIQNGYFDCVVLDLGLPDMSGFEL
IEKIKQQPNGEALPIIVYTARELNRAEDTQLRRLAETIIIKDVRSPERLLDETALFLHRV
QANMPAPKREILEQLHSTDSVLAGKKVLIVDDDVRNIFALTSMLERYQMQVLYAENGRDG
IEVLQNTPDINVVLMDVMMPEMDGYETTRQIRQNNQFKSLPIIALTAKAMQGDREKCIEA
GASDYITKPVDIEQLLSLLRVWLFR
NT seq
6738 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgaacagttaacgagagaaaccgataatctggatttaagacagctattgaaa
acgctggcagccgtcaaaaaaggagacttttctgcccgtatgcccttagatcaaacaggc
atggcaggaaaaatcgctgatacgctcaacgatattattgaacaaaatgaacggctgaca
gaagagctacagcgaattagtaatgttgttgggaaagacggcaaaatcagcgaacgtgcc
tctctaggaaaagttcaaggttcttggtcagattgtgttgattctgtcaacaccctagtg
acagatttagtccagccgacagcggaaacagcgcgtgtgatccgggctgtggcgaatggt
gacttatctcaaacgatcgcaccagaaattgaaggtagacccttgaaaggggaatttctg
caaactgcccaaatggtcaatacgatggtggggcagttgaactcgtttgcatctgaggtg
acacgagtcgcccgagaggtgggaaccgaaggcaaactgggcgtacaagcggaagttcgg
ggtgttgcgggaacttggaaggatttgactgacaacgtcaacttgatggcggggaatttg
acggcacaagttcgcaatattgcggaagtgacgacagcagtggcaaacggcgacctttct
aagaaaattactgttaatgttaacggtgaaattctggagttgaaaaacaccatcaacaca
atggtggatcaacttaattcctttgcatcagaagtcacacgggttgcccgtggggtggga
accgaaggcaaactgggcgtacaagcagaagtgagtggtgttgcgggaacttggaaggat
ttgaccgacagcgtcaacttgatggcggggaacttgacggcacaattgcgcaacattgcc
gaagtaacgacagcagtggcaaatggcgacctttccaagaaaattactgttgatgtcaaa
ggcgaaattctggagttgaagaacaccgttaacatcatggtggatcagctcaactccttc
gcatcggaagtgacgcgggtcgcccgtgaggtaggtgcagatggtaaactaggcggtcaa
gcggaagtacggggtgttgcggggacttggaaggatttgaccgacagtgtgaatttcatg
gcaggttctttgacggcacaggtgcggaacatcgctgaagtaacaacggcggtggcaaac
ggtgacttatcgaagaaaatcaccgtagatgtgaaaggcgaaattttggagttgaaaaac
actattaatacaatggtggatcagctcaattcctttgcatcagaggtgacgcgggttgcc
cgtgaagtgggaaccgaaggtaagctgggcgtacaagcagaagtgcgaggcgttgccgga
acttggaaggacttgacggataacgtgaacttgatggcaggttccttgacggcacaggtg
cggaatattgctgaagtgaccacagcgatcgccaatggtgacctctctaagaaaattact
gttgatgttagaggtgagatttgggagttgaagaacaccgtgaacatcatggtggatcag
ctcaactccttcgcatcggaggtgacgcgagttgcccgtgaggtgggtgcagatggtaaa
cttggcggtcaagcggaagtccggggtgttgcgggaacttggaaggacttgacggacagt
gtaaatttcatggcgggttccttgacagcgcaggtgcggaatatcgcggaagtgacgacg
gcggtggcaacaggtgacctctcgaagaaaattactgttgatgtcaaaggcgaaattctg
gagttgaagaacactattaatacgatggtggatcaactcaactccttcgcctcggaggtg
acgcgggtagcccgtgaagttggcaccgaaggtaagctgggcgtacaagcagaagtacga
ggtgtggcggggacttggaaggacttgaccgataacgtgaacttgatggcgggttcgttg
acttcacaagtgcggaacatcgcggaagtgacgacggcggtggcaaatggtgacctctcg
aagaaaattactgttgatgtcaaaggcgaaattttggagttgaaaaacaccattaataca
atggtggatcaactgagttccttcgccagcgaggtaacacgagtcgcccgtgaggtgggt
tctgaaggcaagctgggtgtacaagccgatgtgaaaggcgttgccggaacttggaaggac
ttgactgactcggttaacttcatggcgggttccttgacggcgcaggtgcgaaacattgcc
gacgtgacgacagcgatcgccaacggtgacctttctaagaaaatcactgtgcaagtcaaa
ggggaaattttggagttgaaaaacaccatcaatatcatggtggatcaactcaactccttt
gcatcggaggtgacgcgggttgcccgtgaagtgggttctgaaggtaagctgggtgtacaa
gcggatgtgcgcggtgttgccggaacttggaaagatttgaccgacagcgtgaacttcatg
gcgggttcgttgacggcacaggtgcggaacattgccacagtcaccacggcggtggcaact
ggcgacctttctaagaaaatcaccgttgatgtcaaaggcgaaattttggaactcaagaac
accataaatacaatggtggatcagctaaactcgtttgcttctgaggtgacgcgagttgcc
cgtgaagtgggaaccgaaggtaagctgggcgtgcaagcggaagttcggggagttgcggga
acttggaaggacttaaccgacagcgtgaattcgatggcgggttcgttgacggcacaggtg
cggaacattgccgaagtcacaacggcggtggcaaacggcgacctttctaagaaaattact
gttgatgtcaaaggtgaaattttggagttgaagaacactatcaatacgatggtggaccaa
ctcaactcgtttgcatccgaggtgacgcgagttgcccgtgaggtgggaaccgaaggtaag
ttaggtgtgcaagcttatgtcagaggtgttgccggtacgtggaaagatttgaccgacaac
ttcaacttgatggcaggtaacttgacggcacaactgcggaacattgccgaagtgacaaag
gcagtggcaacaggtgacttatcgaagaaaatcaccgttgatgtcaaaggcgaaattctg
gaacttaagaacaccattaatacaatggtggatcagctgagttcctttgcatcagaggtg
acgcgagttgcccgtgaggtgggaaccgaaggtaaattgggcggacaagcccaagtgcaa
ggtgtagctgggacttggaaagatttgaccgacaacgtgaactcgatggcagggaacttg
acggcacaagtgcgaggcattgccaaagtggtgacggcagttgctaacggtgacttgaag
cggaaactgatgctggatgccaaaggagaaattgaaactttggcagaaacaatcaacgaa
atgattgacacgctggcgacgtttgccaaccaagtcaccaccgtggcgcgtgaggtgggt
attgaaggtaagttgggtggacaagccaaagtgccaggggcggcgggaacttggaaagat
ttgaccgacaacgtcaacgaactggctgctaccctcaccactcagttgcgggcgatcgcc
gaggtggcaacggctgtgaccaaaggcgacttaacgcgttcgattgccgtggaagcagaa
ggtgaggtcgccatcctcaaagacaacatcaaccagatgattgccaacctgcgggagaca
acgcagaaaaacactgaacaagactggttgaaaacgaacctcgccaagtttacccgaatg
cttcagggtcagcgtgatctagaaacggtgtctaaactgattctctccgagttagcaccg
ttagtgggagcttcgcatggcgtcttctatatcatggattctgcggaagagacgcagtat
ttgaagttactcagcagctacgcataccgcgagcgcaggcatcttgccaaccgcttctac
ttgggtgaaggtttagtgggacaatccgctttggaaaaagaacgcattctgctgacagaa
gtcccgcacgactatatcaagattagttctggcttaggcgaatttacgccgctgaatgtc
gttgtgttacctgtactgtttgaaggacaagtcacagcagttattgaactcgcttcattc
cgccgctttagcgagattcatctgtcattcttcgaccaactcaccgaaagtatcgcgatc
gtgttgaacaccatcgccgccagtatgcgtactgaagagttacttaaacagtcgcagtct
ttggcacacgagttacaaagtcaacaaaacgaactgcgagaaaccaacaagcggctagaa
caacaggctcaatcgctcaaagcctccgaggatttactgaagaaacagcaagaagagtta
caagaaaccaacgcttctctcgaagaaaggtccgagttattagctttacaaaacaaagaa
gtcgaacgcaaaaatcaagaaattgaaaaggcaagccgagaattagaagagaaagcagaa
caactggcgctctcgtcaagatacaagtctgagtttctcgcaaatatgtcccacgaattg
cggacaccgttgaacagcttgttgattttggcgaaattgctgacagataatgtcgagaag
aacctcactgccaaacaagtcgagtatagccgtacgatttactcagcaggcaatgacttg
ttaacgctgatcaacgacattttagatttagcaaaaattgaatctggaacaatgtcaatt
gacgtagaccagatgctgtttacagaattgcaagaacacattgagcgtacctttcgacaa
gtcgctattgacaaagggctcaatttcaccgttgactgtgctccgaatttgcccagaagc
atccacacagatgcaaagcgcttacaacaagtcttgaaaaatctgcttgccaatgctttt
aaatttacagaacgtggagaagtccgcttgcacatcttcgtggcaacacaagggtggagt
cccgatcacgcaactttgagccacgctcaaactgtgatcgctttcgcagtcagcgatacg
ggaattggcattgcccctgaaaagcaaaggatcattttcgaggcgtttcaacaagctgat
ggcaccacgagtcgcaaatatggtggtacggggttaggcttatcaattagccgcgaaatc
acccgtcttcttggtggagaaattaaattaacgagccgtcttggggaaggtagtacgttt
acactttacttaccccagtcgcttcactcagatcaagagatgggaacatgggaagatgga
cagaggatttcaccacagccctccaccagggcacttcgtcacaaaacaccccaaccttat
tctgcccttgagacacgcttcgcgctgagcgcaccgcaagcatacgtgaacgtggactct
agccccgcatctggcgaacctcctattacaacaagccccaacagcatatcacccgaccaa
atcaccagttccctgcttgatgacagaggcaatatccaagagggcgatcgcatacttctc
atcgtcgaagatgacgttaattttgcccgtattcttttagacatgacgcgacaacaagga
tttaagggcattgtcgcccacagtggcagtacgggtttagcgctggcacaacaatttcag
ccttcagcgatcatcttggatatccgcttacctggaatggatggttgggcagtgctggat
cgcctcaagcatgatccaagtacccgtcatatcccagtccatattatgacagttgaggag
ggacgacagcgcggattgcaactaggcgcaattgcttatatccaaaagcccgttagtagt
gaggcgttgcatcaagcattgaccaaaatcaaaggtttcgtcgaacgccgggtgaaaaat
ctactcgtcgtggaagacgacgagaatcaacggcacagcatagtggagttgattggcaac
accgatgttgccaccactgctgtccgcaccggtgccgaggcgctagaagccatacaaaat
gggtattttgattgtgtcgttctcgatttaggtttgcccgacatgagcgggtttgaactg
atcgaaaaaatcaaacaacaacccaatggtgaagcactaccaattatcgtctacactgcc
agagaattgaatagagcagaagacactcaactcaggcgcttggcagagacgattattatt
aaagatgtccgctctccagaacgtctgcttgatgaaacagccttgttcctgcacagagtt
caggcaaatatgcctgcccccaagcgagaaattctggaacagttgcattccactgactca
gtacttgcgggtaaaaaagttctcattgtagatgacgatgtgcgtaatatctttgccctc
acaagtatgctagagcgttatcaaatgcaggtcttatatgccgaaaatgggagagatggc
atcgaagttttgcaaaatacacctgatattaatgtggtgttgatggatgtgatgatgcca
gaaatggatggttatgaaacaacccgccaaatccgacagaacaatcaatttaaatccctg
ccgattattgcactaaccgcaaaggcaatgcaaggcgacagagaaaagtgtattgaagca
ggtgcatcggactacatcaccaaacctgtagatatcgaacagttgctttcactgttgcgc
gtgtggttatttcgttaa
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